Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.61□□□□□ -0.23
MT-ND1P03886 AC098850.1-201ENST00000419919 790 ntBASIC13.61□□□□□ -0.23
MT-ND1P03886 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.61□□□□□ -0.23
MT-ND1P03886 SERBP1P5-201ENST00000510079 1181 ntBASIC13.61□□□□□ -0.23
MT-ND1P03886 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.61□□□□□ -0.23
MT-ND1P03886 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.61□□□□□ -0.23
MT-ND1P03886 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
MT-ND1P03886 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.61□□□□□ -0.23
MT-ND1P03886 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
MT-ND1P03886 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.61□□□□□ -0.23
MT-ND1P03886 AL132655.2-201ENST00000596276 594 ntBASIC13.61□□□□□ -0.23
MT-ND1P03886 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.61□□□□□ -0.23
MT-ND1P03886 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.61□□□□□ -0.23
MT-ND1P03886 AJ011932.1-201ENST00000621707 465 ntBASIC13.61□□□□□ -0.23
MT-ND1P03886 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
MT-ND1P03886 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
MT-ND1P03886 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MT-ND1P03886 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
MT-ND1P03886 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MT-ND1P03886 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MT-ND1P03886 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
MT-ND1P03886 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
MT-ND1P03886 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
MT-ND1P03886 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MT-ND1P03886 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MT-ND1P03886 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
MT-ND1P03886 AC007541.1-201ENST00000570282 1469 ntBASIC13.61□□□□□ -0.23
MT-ND1P03886 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
MT-ND1P03886 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
MT-ND1P03886 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MT-ND1P03886 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
MT-ND1P03886 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
MT-ND1P03886 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
MT-ND1P03886 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MT-ND1P03886 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MT-ND1P03886 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MT-ND1P03886 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MT-ND1P03886 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
MT-ND1P03886 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
MT-ND1P03886 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
MT-ND1P03886 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MT-ND1P03886 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MT-ND1P03886 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MT-ND1P03886 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
MT-ND1P03886 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MT-ND1P03886 CR383656.2-201ENST00000548656 2254 ntBASIC13.6□□□□□ -0.23
MT-ND1P03886 AL445250.1-201ENST00000641671 2259 ntBASIC13.6□□□□□ -0.23
MT-ND1P03886 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
MT-ND1P03886 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.6□□□□□ -0.23
MT-ND1P03886 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.6□□□□□ -0.23
MT-ND1P03886 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
MT-ND1P03886 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MT-ND1P03886 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MT-ND1P03886 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
MT-ND1P03886 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC13.6□□□□□ -0.23
MT-ND1P03886 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
MT-ND1P03886 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.6□□□□□ -0.23
MT-ND1P03886 ACKR1-201ENST00000368121 1240 ntBASIC13.6□□□□□ -0.23
MT-ND1P03886 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
MT-ND1P03886 ACTBP8-201ENST00000403258 1108 ntBASIC13.6□□□□□ -0.23
MT-ND1P03886 MYCLP2-201ENST00000449268 967 ntBASIC13.6□□□□□ -0.23
MT-ND1P03886 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.6□□□□□ -0.23
MT-ND1P03886 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.6□□□□□ -0.23
MT-ND1P03886 ENPP7P5-201ENST00000541031 1031 ntBASIC13.6□□□□□ -0.23
MT-ND1P03886 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MT-ND1P03886 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.6□□□□□ -0.23
MT-ND1P03886 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
MT-ND1P03886 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MT-ND1P03886 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
MT-ND1P03886 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC13.6□□□□□ -0.23
MT-ND1P03886 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
MT-ND1P03886 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MT-ND1P03886 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MT-ND1P03886 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MT-ND1P03886 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
MT-ND1P03886 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
MT-ND1P03886 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
MT-ND1P03886 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MT-ND1P03886 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
MT-ND1P03886 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MT-ND1P03886 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MT-ND1P03886 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
MT-ND1P03886 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
MT-ND1P03886 AC004623.1-201ENST00000624592 2127 ntBASIC13.6□□□□□ -0.23
MT-ND1P03886 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
MT-ND1P03886 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
MT-ND1P03886 GOLGA8EP-201ENST00000530246 1959 ntBASIC13.6□□□□□ -0.23
MT-ND1P03886 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.6□□□□□ -0.23
MT-ND1P03886 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
MT-ND1P03886 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
MT-ND1P03886 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
MT-ND1P03886 MIR193BHG-211ENST00000641433 5365 ntBASIC13.59□□□□□ -0.23
MT-ND1P03886 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MT-ND1P03886 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MT-ND1P03886 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
MT-ND1P03886 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
MT-ND1P03886 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MT-ND1P03886 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MT-ND1P03886 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MT-ND1P03886 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms