Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 AC007431.3-201ENST00000623221 587 ntBASIC12.4□□□□□ -0.42
HLA-DQB1P01920 AC079781.4-201ENST00000641908 219 ntBASIC12.4□□□□□ -0.42
HLA-DQB1P01920 SALL4P6-201ENST00000429385 1691 ntBASIC12.4□□□□□ -0.42
HLA-DQB1P01920 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
HLA-DQB1P01920 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 AC102953.2-201ENST00000609755 3026 ntBASIC12.39□□□□□ -0.43
HLA-DQB1P01920 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 ARSEP1-201ENST00000420443 635 ntBASIC12.39□□□□□ -0.43
HLA-DQB1P01920 RASL12-203ENST00000434605 982 ntTSL 2 BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 FAM86GP-201ENST00000448322 971 ntBASIC12.39□□□□□ -0.43
HLA-DQB1P01920 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 RPL13AP25-201ENST00000484130 612 ntBASIC12.39□□□□□ -0.43
HLA-DQB1P01920 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 AC005586.2-201ENST00000563946 837 ntBASIC12.39□□□□□ -0.43
HLA-DQB1P01920 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 ARL16-202ENST00000570561 768 ntTSL 2 BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 AC138696.2-201ENST00000607376 223 ntBASIC12.39□□□□□ -0.43
HLA-DQB1P01920 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 AC020910.5-201ENST00000623668 1865 ntBASIC12.39□□□□□ -0.43
HLA-DQB1P01920 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 AC025183.3-201ENST00000623526 1482 ntBASIC12.39□□□□□ -0.43
HLA-DQB1P01920 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
HLA-DQB1P01920 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 PER1-202ENST00000354903 3115 ntTSL 2 BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 SARS-202ENST00000369923 1882 ntTSL 5 BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms