Protein–RNA interactions for Protein: Q9P0I2

EMC3, ER membrane protein complex subunit 3, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMC3Q9P0I2 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.16□□□□□ -0.3
EMC3Q9P0I2 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC13.16□□□□□ -0.3
EMC3Q9P0I2 AL033527.4-201ENST00000641026 673 ntBASIC13.16□□□□□ -0.3
EMC3Q9P0I2 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
EMC3Q9P0I2 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
EMC3Q9P0I2 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
EMC3Q9P0I2 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
EMC3Q9P0I2 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
EMC3Q9P0I2 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
EMC3Q9P0I2 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
EMC3Q9P0I2 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
EMC3Q9P0I2 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
EMC3Q9P0I2 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
EMC3Q9P0I2 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
EMC3Q9P0I2 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
EMC3Q9P0I2 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
EMC3Q9P0I2 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
EMC3Q9P0I2 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
EMC3Q9P0I2 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
EMC3Q9P0I2 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
EMC3Q9P0I2 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
EMC3Q9P0I2 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
EMC3Q9P0I2 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
EMC3Q9P0I2 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
EMC3Q9P0I2 Z82170.1-201ENST00000625081 3192 ntBASIC13.15□□□□□ -0.3
EMC3Q9P0I2 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
EMC3Q9P0I2 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.15□□□□□ -0.3
EMC3Q9P0I2 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
EMC3Q9P0I2 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
EMC3Q9P0I2 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
EMC3Q9P0I2 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.15□□□□□ -0.3
EMC3Q9P0I2 MIR326-201ENST00000362220 95 ntBASIC13.15□□□□□ -0.3
EMC3Q9P0I2 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
EMC3Q9P0I2 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.15□□□□□ -0.3
EMC3Q9P0I2 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.15□□□□□ -0.3
EMC3Q9P0I2 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.15□□□□□ -0.3
EMC3Q9P0I2 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
EMC3Q9P0I2 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
EMC3Q9P0I2 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.15□□□□□ -0.3
EMC3Q9P0I2 RN7SL219P-201ENST00000582872 296 ntBASIC13.15□□□□□ -0.3
EMC3Q9P0I2 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.15□□□□□ -0.3
EMC3Q9P0I2 AC091271.1-201ENST00000611877 1162 ntBASIC13.15□□□□□ -0.3
EMC3Q9P0I2 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.15□□□□□ -0.3
EMC3Q9P0I2 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
EMC3Q9P0I2 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.15□□□□□ -0.3
EMC3Q9P0I2 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
EMC3Q9P0I2 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.15□□□□□ -0.3
EMC3Q9P0I2 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
EMC3Q9P0I2 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
EMC3Q9P0I2 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.15□□□□□ -0.3
EMC3Q9P0I2 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
EMC3Q9P0I2 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
EMC3Q9P0I2 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
EMC3Q9P0I2 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.15□□□□□ -0.3
EMC3Q9P0I2 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
EMC3Q9P0I2 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
EMC3Q9P0I2 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
EMC3Q9P0I2 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
EMC3Q9P0I2 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
EMC3Q9P0I2 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
EMC3Q9P0I2 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
EMC3Q9P0I2 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
EMC3Q9P0I2 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.15□□□□□ -0.31
EMC3Q9P0I2 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
EMC3Q9P0I2 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
EMC3Q9P0I2 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
EMC3Q9P0I2 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.14□□□□□ -0.31
EMC3Q9P0I2 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.14□□□□□ -0.31
EMC3Q9P0I2 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
EMC3Q9P0I2 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
EMC3Q9P0I2 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
EMC3Q9P0I2 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
EMC3Q9P0I2 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.14□□□□□ -0.31
EMC3Q9P0I2 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
EMC3Q9P0I2 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
EMC3Q9P0I2 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
EMC3Q9P0I2 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.14□□□□□ -0.31
EMC3Q9P0I2 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC13.14□□□□□ -0.31
EMC3Q9P0I2 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
EMC3Q9P0I2 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
EMC3Q9P0I2 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
EMC3Q9P0I2 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.14□□□□□ -0.31
EMC3Q9P0I2 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.14□□□□□ -0.31
EMC3Q9P0I2 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.14□□□□□ -0.31
EMC3Q9P0I2 AL354877.1-201ENST00000424412 413 ntBASIC13.14□□□□□ -0.31
EMC3Q9P0I2 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
EMC3Q9P0I2 HSPB1P2-201ENST00000448722 546 ntBASIC13.14□□□□□ -0.31
EMC3Q9P0I2 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
EMC3Q9P0I2 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
EMC3Q9P0I2 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
EMC3Q9P0I2 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.14□□□□□ -0.31
EMC3Q9P0I2 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC13.14□□□□□ -0.31
EMC3Q9P0I2 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.14□□□□□ -0.31
EMC3Q9P0I2 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.14□□□□□ -0.31
EMC3Q9P0I2 AC100827.2-201ENST00000563214 1194 ntBASIC13.14□□□□□ -0.31
EMC3Q9P0I2 DUX4L46-201ENST00000566845 751 ntBASIC13.14□□□□□ -0.31
EMC3Q9P0I2 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.14□□□□□ -0.31
EMC3Q9P0I2 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
EMC3Q9P0I2 AC027601.3-201ENST00000622907 509 ntBASIC13.14□□□□□ -0.31
EMC3Q9P0I2 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms