Protein–RNA interactions for Protein: Q9HCJ0

TNRC6C, Trinucleotide repeat-containing gene 6C protein, humanhuman

Known RBP Predictions only

Length 1,690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6CQ9HCJ0 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNRC6CQ9HCJ0 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TNRC6CQ9HCJ0 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNRC6CQ9HCJ0 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNRC6CQ9HCJ0 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
TNRC6CQ9HCJ0 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC17.12■□□□□ 0.33
TNRC6CQ9HCJ0 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.12■□□□□ 0.33
TNRC6CQ9HCJ0 TUBB4AP1-201ENST00000450755 1325 ntBASIC17.12■□□□□ 0.33
TNRC6CQ9HCJ0 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNRC6CQ9HCJ0 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNRC6CQ9HCJ0 TKT-201ENST00000296289 1931 ntTSL 5 BASIC17.12■□□□□ 0.33
TNRC6CQ9HCJ0 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNRC6CQ9HCJ0 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNRC6CQ9HCJ0 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TNRC6CQ9HCJ0 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TNRC6CQ9HCJ0 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC17.11■□□□□ 0.33
TNRC6CQ9HCJ0 AL513477.1-201ENST00000602865 2407 ntBASIC17.11■□□□□ 0.33
TNRC6CQ9HCJ0 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNRC6CQ9HCJ0 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNRC6CQ9HCJ0 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNRC6CQ9HCJ0 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNRC6CQ9HCJ0 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TNRC6CQ9HCJ0 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC17.11■□□□□ 0.33
TNRC6CQ9HCJ0 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TNRC6CQ9HCJ0 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TNRC6CQ9HCJ0 CASP2-203ENST00000392925 616 ntTSL 3 BASIC17.11■□□□□ 0.33
TNRC6CQ9HCJ0 U73169.1-201ENST00000395152 367 ntBASIC17.11■□□□□ 0.33
TNRC6CQ9HCJ0 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC17.11■□□□□ 0.33
TNRC6CQ9HCJ0 AC011431.1-201ENST00000512971 230 ntBASIC17.11■□□□□ 0.33
TNRC6CQ9HCJ0 RNA5SP420-201ENST00000516997 137 ntBASIC17.11■□□□□ 0.33
TNRC6CQ9HCJ0 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC17.11■□□□□ 0.33
TNRC6CQ9HCJ0 ACY3-202ENST00000529256 933 ntTSL 3 BASIC17.11■□□□□ 0.33
TNRC6CQ9HCJ0 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC17.11■□□□□ 0.33
TNRC6CQ9HCJ0 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC17.11■□□□□ 0.33
TNRC6CQ9HCJ0 AC005746.3-201ENST00000614751 393 ntBASIC17.11■□□□□ 0.33
TNRC6CQ9HCJ0 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TNRC6CQ9HCJ0 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNRC6CQ9HCJ0 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNRC6CQ9HCJ0 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
TNRC6CQ9HCJ0 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNRC6CQ9HCJ0 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNRC6CQ9HCJ0 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.11■□□□□ 0.33
TNRC6CQ9HCJ0 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
TNRC6CQ9HCJ0 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNRC6CQ9HCJ0 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNRC6CQ9HCJ0 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNRC6CQ9HCJ0 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TNRC6CQ9HCJ0 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TNRC6CQ9HCJ0 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TNRC6CQ9HCJ0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNRC6CQ9HCJ0 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 AC041040.1-201ENST00000425197 460 ntBASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 AL773545.2-201ENST00000442149 472 ntBASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 AC016582.2-202ENST00000587765 1094 ntBASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 SNU13-204ENST00000402458 462 ntTSL 3 BASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 AC147876.1-201ENST00000504408 322 ntBASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 NF1P11-201ENST00000621292 1282 ntBASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC17.1■□□□□ 0.33
TNRC6CQ9HCJ0 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNRC6CQ9HCJ0 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.09■□□□□ 0.33
TNRC6CQ9HCJ0 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.09■□□□□ 0.33
TNRC6CQ9HCJ0 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms