Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC12.82□□□□□ -0.36
RFT1Q96AA3 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RFT1Q96AA3 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC12.82□□□□□ -0.36
RFT1Q96AA3 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RFT1Q96AA3 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.82□□□□□ -0.36
RFT1Q96AA3 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RFT1Q96AA3 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RFT1Q96AA3 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RFT1Q96AA3 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RFT1Q96AA3 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
RFT1Q96AA3 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RFT1Q96AA3 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RFT1Q96AA3 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RFT1Q96AA3 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
RFT1Q96AA3 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RFT1Q96AA3 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
RFT1Q96AA3 AL136172.1-201ENST00000598590 1394 ntBASIC12.81□□□□□ -0.36
RFT1Q96AA3 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
RFT1Q96AA3 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RFT1Q96AA3 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RFT1Q96AA3 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.81□□□□□ -0.36
RFT1Q96AA3 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
RFT1Q96AA3 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RFT1Q96AA3 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RFT1Q96AA3 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.81□□□□□ -0.36
RFT1Q96AA3 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RFT1Q96AA3 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
RFT1Q96AA3 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
RFT1Q96AA3 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RFT1Q96AA3 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RFT1Q96AA3 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
RFT1Q96AA3 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.81□□□□□ -0.36
RFT1Q96AA3 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RFT1Q96AA3 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RFT1Q96AA3 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
RFT1Q96AA3 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
RFT1Q96AA3 EIF3FP3-201ENST00000434851 1086 ntBASIC12.81□□□□□ -0.36
RFT1Q96AA3 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.81□□□□□ -0.36
RFT1Q96AA3 GALT-202ENST00000450095 1280 ntTSL 2 BASIC12.81□□□□□ -0.36
RFT1Q96AA3 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
RFT1Q96AA3 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
RFT1Q96AA3 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RFT1Q96AA3 INGX-202ENST00000489074 768 ntBASIC12.81□□□□□ -0.36
RFT1Q96AA3 HNRNPA1P13-201ENST00000510646 963 ntBASIC12.81□□□□□ -0.36
RFT1Q96AA3 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC12.81□□□□□ -0.36
RFT1Q96AA3 RFPL4AP1-201ENST00000530883 850 ntBASIC12.81□□□□□ -0.36
RFT1Q96AA3 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RFT1Q96AA3 AC135782.3-201ENST00000562782 2105 ntBASIC12.81□□□□□ -0.36
RFT1Q96AA3 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.81□□□□□ -0.36
RFT1Q96AA3 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
RFT1Q96AA3 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.81□□□□□ -0.36
RFT1Q96AA3 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RFT1Q96AA3 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RFT1Q96AA3 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RFT1Q96AA3 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
RFT1Q96AA3 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RFT1Q96AA3 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC12.81□□□□□ -0.36
RFT1Q96AA3 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RFT1Q96AA3 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.81□□□□□ -0.36
RFT1Q96AA3 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
RFT1Q96AA3 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
RFT1Q96AA3 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.81□□□□□ -0.36
RFT1Q96AA3 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.81□□□□□ -0.36
RFT1Q96AA3 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
RFT1Q96AA3 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RFT1Q96AA3 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
RFT1Q96AA3 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RFT1Q96AA3 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RFT1Q96AA3 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RFT1Q96AA3 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RFT1Q96AA3 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RFT1Q96AA3 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RFT1Q96AA3 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RFT1Q96AA3 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RFT1Q96AA3 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
RFT1Q96AA3 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC12.8□□□□□ -0.36
RFT1Q96AA3 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.8□□□□□ -0.36
RFT1Q96AA3 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RFT1Q96AA3 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
RFT1Q96AA3 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RFT1Q96AA3 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RFT1Q96AA3 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.8□□□□□ -0.36
RFT1Q96AA3 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
RFT1Q96AA3 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.8□□□□□ -0.36
RFT1Q96AA3 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.8□□□□□ -0.36
RFT1Q96AA3 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.8□□□□□ -0.36
RFT1Q96AA3 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
RFT1Q96AA3 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
RFT1Q96AA3 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RFT1Q96AA3 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.8□□□□□ -0.36
RFT1Q96AA3 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RFT1Q96AA3 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.8□□□□□ -0.36
RFT1Q96AA3 AC011498.7-201ENST00000624986 2027 ntBASIC12.8□□□□□ -0.36
RFT1Q96AA3 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RFT1Q96AA3 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.8□□□□□ -0.36
RFT1Q96AA3 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.8□□□□□ -0.36
RFT1Q96AA3 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RFT1Q96AA3 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
RFT1Q96AA3 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
RFT1Q96AA3 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms