Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 RBPMS2P1-201ENST00000437762 623 ntBASIC10.76□□□□□ -0.69
NUP35Q8NFH5 SPDYE14P-201ENST00000442619 822 ntBASIC10.76□□□□□ -0.69
NUP35Q8NFH5 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 SATB1-217ENST00000493952 626 ntTSL 3 BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 JPT2-214ENST00000569765 782 ntTSL 2 BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 AL603764.1-201ENST00000636452 321 ntBASIC10.76□□□□□ -0.69
NUP35Q8NFH5 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 AC002350.2-201ENST00000623894 1828 ntBASIC10.76□□□□□ -0.69
NUP35Q8NFH5 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
NUP35Q8NFH5 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 AC022364.1-202ENST00000617468 2409 ntBASIC10.75□□□□□ -0.69
NUP35Q8NFH5 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 AL590440.2-201ENST00000641973 1595 ntBASIC10.75□□□□□ -0.69
NUP35Q8NFH5 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC10.75□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms