Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 XBP1P1-201ENST00000436573 652 ntBASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 AC005740.2-201ENST00000511085 419 ntBASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 SCARNA21-201ENST00000517026 139 ntBASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 AC022748.3-201ENST00000621828 275 ntBASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
SRFBP1Q8NEF9 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 AL022313.4-201ENST00000562756 2046 ntBASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 FAM90A7P-201ENST00000382628 1395 ntBASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 FAM90A23P-201ENST00000400136 1395 ntBASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 VDAC1P1-201ENST00000439229 848 ntBASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 SERPINA13P-202ENST00000478994 924 ntBASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 AC090164.2-201ENST00000611487 516 ntBASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 AC068587.8-201ENST00000641239 219 ntBASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms