Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ARHGEF39Q8N4T4 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.46□□□□□ -0.25
ARHGEF39Q8N4T4 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ARHGEF39Q8N4T4 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC13.46□□□□□ -0.25
ARHGEF39Q8N4T4 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.46□□□□□ -0.25
ARHGEF39Q8N4T4 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ARHGEF39Q8N4T4 AL583805.1-201ENST00000391389 531 ntBASIC13.46□□□□□ -0.25
ARHGEF39Q8N4T4 HMGA1P1-201ENST00000415560 1062 ntBASIC13.46□□□□□ -0.25
ARHGEF39Q8N4T4 AC073869.2-201ENST00000417338 1026 ntBASIC13.46□□□□□ -0.25
ARHGEF39Q8N4T4 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC13.46□□□□□ -0.25
ARHGEF39Q8N4T4 PPP1R2P4-201ENST00000424051 595 ntBASIC13.46□□□□□ -0.25
ARHGEF39Q8N4T4 FTH1P22-201ENST00000456305 520 ntBASIC13.46□□□□□ -0.25
ARHGEF39Q8N4T4 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ARHGEF39Q8N4T4 CHCHD2P2-201ENST00000503744 321 ntBASIC13.46□□□□□ -0.25
ARHGEF39Q8N4T4 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
ARHGEF39Q8N4T4 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC13.46□□□□□ -0.25
ARHGEF39Q8N4T4 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC13.46□□□□□ -0.25
ARHGEF39Q8N4T4 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC13.46□□□□□ -0.25
ARHGEF39Q8N4T4 AC084346.2-201ENST00000607097 949 ntBASIC13.46□□□□□ -0.25
ARHGEF39Q8N4T4 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC13.46□□□□□ -0.25
ARHGEF39Q8N4T4 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC13.46□□□□□ -0.25
ARHGEF39Q8N4T4 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC13.46□□□□□ -0.25
ARHGEF39Q8N4T4 AC068587.10-201ENST00000641210 219 ntBASIC13.46□□□□□ -0.25
ARHGEF39Q8N4T4 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ARHGEF39Q8N4T4 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ARHGEF39Q8N4T4 MARK2P16-201ENST00000605714 1723 ntBASIC13.46□□□□□ -0.25
ARHGEF39Q8N4T4 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.46□□□□□ -0.25
ARHGEF39Q8N4T4 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
ARHGEF39Q8N4T4 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.46□□□□□ -0.26
ARHGEF39Q8N4T4 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
ARHGEF39Q8N4T4 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
ARHGEF39Q8N4T4 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
ARHGEF39Q8N4T4 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
ARHGEF39Q8N4T4 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ARHGEF39Q8N4T4 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.46□□□□□ -0.26
ARHGEF39Q8N4T4 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
ARHGEF39Q8N4T4 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
ARHGEF39Q8N4T4 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
ARHGEF39Q8N4T4 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.46□□□□□ -0.26
ARHGEF39Q8N4T4 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ARHGEF39Q8N4T4 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 UFM1-202ENST00000379649 846 ntTSL 4 BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 GOLGA2P8-201ENST00000505201 779 ntBASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ARHGEF39Q8N4T4 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms