Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC13.02□□□□□ -0.33
ATG4DQ86TL0 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ATG4DQ86TL0 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
ATG4DQ86TL0 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
ATG4DQ86TL0 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC13.02□□□□□ -0.33
ATG4DQ86TL0 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.02□□□□□ -0.33
ATG4DQ86TL0 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.02□□□□□ -0.33
ATG4DQ86TL0 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
ATG4DQ86TL0 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.02□□□□□ -0.33
ATG4DQ86TL0 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.02□□□□□ -0.33
ATG4DQ86TL0 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATG4DQ86TL0 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC13.02□□□□□ -0.33
ATG4DQ86TL0 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.02□□□□□ -0.33
ATG4DQ86TL0 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATG4DQ86TL0 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATG4DQ86TL0 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.02□□□□□ -0.33
ATG4DQ86TL0 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ATG4DQ86TL0 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.02□□□□□ -0.33
ATG4DQ86TL0 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ATG4DQ86TL0 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.02□□□□□ -0.33
ATG4DQ86TL0 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.02□□□□□ -0.33
ATG4DQ86TL0 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATG4DQ86TL0 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.02□□□□□ -0.33
ATG4DQ86TL0 AC072061.1-201ENST00000569710 2234 ntBASIC13.02□□□□□ -0.33
ATG4DQ86TL0 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATG4DQ86TL0 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATG4DQ86TL0 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
ATG4DQ86TL0 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ATG4DQ86TL0 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ATG4DQ86TL0 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ATG4DQ86TL0 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.02□□□□□ -0.33
ATG4DQ86TL0 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
ATG4DQ86TL0 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATG4DQ86TL0 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ATG4DQ86TL0 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATG4DQ86TL0 AC004899.1-201ENST00000424687 1714 ntBASIC13.02□□□□□ -0.33
ATG4DQ86TL0 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC13.02□□□□□ -0.33
ATG4DQ86TL0 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.02□□□□□ -0.33
ATG4DQ86TL0 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.02□□□□□ -0.33
ATG4DQ86TL0 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.02□□□□□ -0.33
ATG4DQ86TL0 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATG4DQ86TL0 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 GOLGA8EP-201ENST00000530246 1959 ntBASIC13.01□□□□□ -0.33
ATG4DQ86TL0 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 AL928654.5-201ENST00000624831 2501 ntBASIC13.01□□□□□ -0.33
ATG4DQ86TL0 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 AGER-203ENST00000375065 665 ntTSL 2 BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 HNRNPA1P32-201ENST00000396326 963 ntBASIC13.01□□□□□ -0.33
ATG4DQ86TL0 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 AC092580.1-201ENST00000433998 658 ntBASIC13.01□□□□□ -0.33
ATG4DQ86TL0 POM121L10P-201ENST00000436994 1285 ntBASIC13.01□□□□□ -0.33
ATG4DQ86TL0 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 AP001258.2-201ENST00000529891 490 ntBASIC13.01□□□□□ -0.33
ATG4DQ86TL0 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 AL606495.2-201ENST00000605867 535 ntBASIC13.01□□□□□ -0.33
ATG4DQ86TL0 AL451050.2-201ENST00000606967 682 ntBASIC13.01□□□□□ -0.33
ATG4DQ86TL0 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC13.01□□□□□ -0.33
ATG4DQ86TL0 AC092299.1-201ENST00000632679 757 ntBASIC13.01□□□□□ -0.33
ATG4DQ86TL0 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 AP002353.1-201ENST00000528257 1599 ntBASIC13.01□□□□□ -0.33
ATG4DQ86TL0 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ATG4DQ86TL0 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms