Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CCDC144NLQ6NUI1 USP4-203ENST00000415188 1454 ntTSL 3 BASIC11.71□□□□□ -0.53
CCDC144NLQ6NUI1 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CCDC144NLQ6NUI1 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC11.71□□□□□ -0.53
CCDC144NLQ6NUI1 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
CCDC144NLQ6NUI1 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CCDC144NLQ6NUI1 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CCDC144NLQ6NUI1 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CCDC144NLQ6NUI1 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC11.71□□□□□ -0.53
CCDC144NLQ6NUI1 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CCDC144NLQ6NUI1 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC11.71□□□□□ -0.53
CCDC144NLQ6NUI1 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC11.71□□□□□ -0.53
CCDC144NLQ6NUI1 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CCDC144NLQ6NUI1 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC11.71□□□□□ -0.53
CCDC144NLQ6NUI1 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC11.71□□□□□ -0.53
CCDC144NLQ6NUI1 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC11.71□□□□□ -0.53
CCDC144NLQ6NUI1 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC11.71□□□□□ -0.53
CCDC144NLQ6NUI1 ST13P19-201ENST00000442505 1124 ntBASIC11.71□□□□□ -0.53
CCDC144NLQ6NUI1 ARTN-209ENST00000479128 471 ntTSL 3 BASIC11.71□□□□□ -0.53
CCDC144NLQ6NUI1 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CCDC144NLQ6NUI1 HLA-J-204ENST00000495278 958 ntBASIC11.71□□□□□ -0.53
CCDC144NLQ6NUI1 AC108725.1-201ENST00000495472 409 ntBASIC11.71□□□□□ -0.53
CCDC144NLQ6NUI1 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
CCDC144NLQ6NUI1 SCARNA21-201ENST00000517026 139 ntBASIC11.71□□□□□ -0.53
CCDC144NLQ6NUI1 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC11.71□□□□□ -0.53
CCDC144NLQ6NUI1 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC11.71□□□□□ -0.53
CCDC144NLQ6NUI1 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC11.71□□□□□ -0.53
CCDC144NLQ6NUI1 AL132994.2-201ENST00000603120 687 ntBASIC11.71□□□□□ -0.53
CCDC144NLQ6NUI1 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CCDC144NLQ6NUI1 MIR6869-201ENST00000619434 62 ntBASIC11.71□□□□□ -0.53
CCDC144NLQ6NUI1 AC100757.4-201ENST00000626934 759 ntBASIC11.71□□□□□ -0.53
CCDC144NLQ6NUI1 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC11.71□□□□□ -0.53
CCDC144NLQ6NUI1 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC11.71□□□□□ -0.53
CCDC144NLQ6NUI1 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC11.71□□□□□ -0.53
CCDC144NLQ6NUI1 AC068587.8-201ENST00000641239 219 ntBASIC11.71□□□□□ -0.53
CCDC144NLQ6NUI1 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
CCDC144NLQ6NUI1 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC11.71□□□□□ -0.53
CCDC144NLQ6NUI1 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC11.71□□□□□ -0.54
CCDC144NLQ6NUI1 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CCDC144NLQ6NUI1 GOLGA8VP-201ENST00000559009 1798 ntBASIC11.71□□□□□ -0.54
CCDC144NLQ6NUI1 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.54
CCDC144NLQ6NUI1 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
CCDC144NLQ6NUI1 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CCDC144NLQ6NUI1 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CCDC144NLQ6NUI1 AC118758.2-201ENST00000614242 2813 ntBASIC11.71□□□□□ -0.54
CCDC144NLQ6NUI1 AC005089.1-201ENST00000619486 2241 ntBASIC11.71□□□□□ -0.54
CCDC144NLQ6NUI1 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CCDC144NLQ6NUI1 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
CCDC144NLQ6NUI1 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
CCDC144NLQ6NUI1 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
CCDC144NLQ6NUI1 FES-203ENST00000394302 2133 ntTSL 5 BASIC11.71□□□□□ -0.54
CCDC144NLQ6NUI1 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.54
CCDC144NLQ6NUI1 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
CCDC144NLQ6NUI1 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
CCDC144NLQ6NUI1 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 AC005840.4-201ENST00000541242 2494 ntBASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 FAM90A7P-201ENST00000382628 1395 ntBASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 FAM90A23P-201ENST00000400136 1395 ntBASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 GSN-209ENST00000449733 2702 ntTSL 2 BASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 COCH-203ENST00000460581 2688 ntTSL 2 BASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 DPM3-202ENST00000368399 517 ntBASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 USP17L6P-201ENST00000382470 1197 ntBASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 AC007274.1-201ENST00000439805 662 ntBASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 KRT8P13-201ENST00000463294 1010 ntBASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 OARD1-204ENST00000464633 717 ntTSL 2 BASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 MARK2P5-201ENST00000507649 634 ntBASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 AC090386.2-201ENST00000623010 1039 ntBASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 PCBP2-OT1-201ENST00000634357 590 ntBASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
CCDC144NLQ6NUI1 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms