Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC079340.2-201ENST00000504957 495 ntTSL 2 BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 RPL30-213ENST00000523172 274 ntTSL 5 BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 AC136475.7-201ENST00000602949 592 ntBASIC13.66□□□□□ -0.22
RIF1Q5UIP0 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 DEGS1-202ENST00000391877 1345 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 CD8B-202ENST00000349455 849 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 YY1P2-201ENST00000438766 948 ntBASIC13.65□□□□□ -0.22
RIF1Q5UIP0 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 AC092135.3-201ENST00000624151 1846 ntBASIC13.65□□□□□ -0.22
RIF1Q5UIP0 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 RPS6-201ENST00000315377 863 ntTSL 3 BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 AC010894.2-201ENST00000444196 561 ntTSL 3 BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 AL353708.1-201ENST00000567904 1257 ntBASIC13.65□□□□□ -0.22
RIF1Q5UIP0 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RIF1Q5UIP0 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
RIF1Q5UIP0 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.23
RIF1Q5UIP0 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
RIF1Q5UIP0 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.65□□□□□ -0.23
RIF1Q5UIP0 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
RIF1Q5UIP0 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 LINC00115-201ENST00000473798 1317 ntBASIC13.64□□□□□ -0.23
RIF1Q5UIP0 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 GZMH-201ENST00000216338 909 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 OAZ3-201ENST00000321531 851 ntTSL 5 BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 MRPL55-210ENST00000366736 660 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 MPV17-209ENST00000405983 859 ntTSL 5 BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 SDHD-214ENST00000614349 516 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms