Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFX7Q2KHR2 KRT17P5-201ENST00000332088 839 ntBASIC17.16■□□□□ 0.34
RFX7Q2KHR2 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RFX7Q2KHR2 BAX-205ENST00000391871 687 ntTSL 5 BASIC17.16■□□□□ 0.34
RFX7Q2KHR2 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFX7Q2KHR2 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RFX7Q2KHR2 CHCHD2P2-201ENST00000503744 321 ntBASIC17.16■□□□□ 0.34
RFX7Q2KHR2 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RFX7Q2KHR2 NEU3-207ENST00000534628 746 ntTSL 2 BASIC17.16■□□□□ 0.34
RFX7Q2KHR2 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC17.16■□□□□ 0.34
RFX7Q2KHR2 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
RFX7Q2KHR2 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFX7Q2KHR2 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC17.16■□□□□ 0.34
RFX7Q2KHR2 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC17.16■□□□□ 0.34
RFX7Q2KHR2 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
RFX7Q2KHR2 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RFX7Q2KHR2 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC17.16■□□□□ 0.34
RFX7Q2KHR2 AC067930.6-201ENST00000623257 4947 ntBASIC17.16■□□□□ 0.34
RFX7Q2KHR2 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
RFX7Q2KHR2 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFX7Q2KHR2 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RFX7Q2KHR2 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
RFX7Q2KHR2 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFX7Q2KHR2 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RFX7Q2KHR2 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFX7Q2KHR2 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFX7Q2KHR2 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFX7Q2KHR2 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RFX7Q2KHR2 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC17.16■□□□□ 0.34
RFX7Q2KHR2 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RFX7Q2KHR2 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFX7Q2KHR2 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
RFX7Q2KHR2 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFX7Q2KHR2 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RFX7Q2KHR2 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 AL512306.1-201ENST00000432698 848 ntBASIC17.15■□□□□ 0.34
RFX7Q2KHR2 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 IGHV3-37-201ENST00000518544 340 ntBASIC17.15■□□□□ 0.34
RFX7Q2KHR2 MBP-227ENST00000526111 581 ntTSL 4 BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 MIR4750-201ENST00000584564 56 ntBASIC17.15■□□□□ 0.34
RFX7Q2KHR2 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 CMC2-204ENST00000562713 573 ntTSL 3 BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 CMC2-209ENST00000565108 399 ntTSL 2 BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 AP001184.1-201ENST00000637936 376 ntBASIC17.15■□□□□ 0.34
RFX7Q2KHR2 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFX7Q2KHR2 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RFX7Q2KHR2 AL139158.3-201ENST00000641212 1562 ntBASIC17.14■□□□□ 0.34
RFX7Q2KHR2 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.34
RFX7Q2KHR2 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RFX7Q2KHR2 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
RFX7Q2KHR2 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RFX7Q2KHR2 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
RFX7Q2KHR2 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC17.14■□□□□ 0.34
RFX7Q2KHR2 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX7Q2KHR2 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX7Q2KHR2 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX7Q2KHR2 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX7Q2KHR2 PCDHA3-202ENST00000532566 4594 ntBASIC17.14■□□□□ 0.33
RFX7Q2KHR2 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RFX7Q2KHR2 CROT-203ENST00000419147 2959 ntTSL 2 BASIC17.14■□□□□ 0.33
RFX7Q2KHR2 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
RFX7Q2KHR2 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC17.14■□□□□ 0.33
RFX7Q2KHR2 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms