Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CXCR4P61073 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CXCR4P61073 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CXCR4P61073 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
CXCR4P61073 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CXCR4P61073 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CXCR4P61073 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CXCR4P61073 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CXCR4P61073 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CXCR4P61073 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CXCR4P61073 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CXCR4P61073 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CXCR4P61073 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CXCR4P61073 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
CXCR4P61073 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CXCR4P61073 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CXCR4P61073 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CXCR4P61073 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CXCR4P61073 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CXCR4P61073 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CXCR4P61073 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CXCR4P61073 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CXCR4P61073 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC13.12□□□□□ -0.31
CXCR4P61073 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CXCR4P61073 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CXCR4P61073 PCDHB19P-202ENST00000625133 2914 ntBASIC13.12□□□□□ -0.31
CXCR4P61073 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CXCR4P61073 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CXCR4P61073 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CXCR4P61073 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CXCR4P61073 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CXCR4P61073 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CXCR4P61073 MRPS18AP1-201ENST00000414458 589 ntBASIC13.12□□□□□ -0.31
CXCR4P61073 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.12□□□□□ -0.31
CXCR4P61073 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.12□□□□□ -0.31
CXCR4P61073 AC003958.1-201ENST00000435883 421 ntBASIC13.12□□□□□ -0.31
CXCR4P61073 GNAQP1-201ENST00000444815 1067 ntBASIC13.12□□□□□ -0.31
CXCR4P61073 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.12□□□□□ -0.31
CXCR4P61073 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.12□□□□□ -0.31
CXCR4P61073 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.12□□□□□ -0.31
CXCR4P61073 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.12□□□□□ -0.31
CXCR4P61073 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.12□□□□□ -0.31
CXCR4P61073 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
CXCR4P61073 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CXCR4P61073 AL359711.2-201ENST00000563105 872 ntBASIC13.12□□□□□ -0.31
CXCR4P61073 AC124283.3-201ENST00000570869 594 ntBASIC13.12□□□□□ -0.31
CXCR4P61073 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.12□□□□□ -0.31
CXCR4P61073 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.12□□□□□ -0.31
CXCR4P61073 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CXCR4P61073 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.12□□□□□ -0.31
CXCR4P61073 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.12□□□□□ -0.31
CXCR4P61073 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC13.12□□□□□ -0.31
CXCR4P61073 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CXCR4P61073 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CXCR4P61073 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CXCR4P61073 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.12□□□□□ -0.31
CXCR4P61073 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CXCR4P61073 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.12□□□□□ -0.31
CXCR4P61073 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CXCR4P61073 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CXCR4P61073 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CXCR4P61073 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
CXCR4P61073 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CXCR4P61073 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC13.12□□□□□ -0.31
CXCR4P61073 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.12□□□□□ -0.31
CXCR4P61073 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
CXCR4P61073 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CXCR4P61073 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
CXCR4P61073 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CXCR4P61073 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CXCR4P61073 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC13.12□□□□□ -0.31
CXCR4P61073 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC13.12□□□□□ -0.31
CXCR4P61073 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC13.12□□□□□ -0.31
CXCR4P61073 TUBB4AP1-201ENST00000450755 1325 ntBASIC13.12□□□□□ -0.31
CXCR4P61073 KRT18P28-201ENST00000453838 1332 ntBASIC13.12□□□□□ -0.31
CXCR4P61073 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CXCR4P61073 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CXCR4P61073 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CXCR4P61073 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CXCR4P61073 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.11□□□□□ -0.31
CXCR4P61073 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC13.11□□□□□ -0.31
CXCR4P61073 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
CXCR4P61073 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CXCR4P61073 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.11□□□□□ -0.31
CXCR4P61073 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.11□□□□□ -0.31
CXCR4P61073 AC108024.1-201ENST00000626286 1721 ntBASIC13.11□□□□□ -0.31
CXCR4P61073 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CXCR4P61073 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CXCR4P61073 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CXCR4P61073 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC13.11□□□□□ -0.31
CXCR4P61073 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CXCR4P61073 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CXCR4P61073 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CXCR4P61073 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CXCR4P61073 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CXCR4P61073 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CXCR4P61073 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CXCR4P61073 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CXCR4P61073 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.11□□□□□ -0.31
CXCR4P61073 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms