Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN6P56747 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CLDN6P56747 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN6P56747 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.75□□□□□ -0.21
CLDN6P56747 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN6P56747 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN6P56747 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN6P56747 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.75□□□□□ -0.21
CLDN6P56747 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CLDN6P56747 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CLDN6P56747 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CLDN6P56747 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN6P56747 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CLDN6P56747 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.74□□□□□ -0.21
CLDN6P56747 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN6P56747 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN6P56747 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.74□□□□□ -0.21
CLDN6P56747 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN6P56747 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
CLDN6P56747 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.74□□□□□ -0.21
CLDN6P56747 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.74□□□□□ -0.21
CLDN6P56747 SAT1-201ENST00000379251 801 ntTSL 2 BASIC13.74□□□□□ -0.21
CLDN6P56747 SAT1-202ENST00000379253 909 ntTSL 2 BASIC13.74□□□□□ -0.21
CLDN6P56747 SAT1-203ENST00000379254 868 ntTSL 3 BASIC13.74□□□□□ -0.21
CLDN6P56747 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN6P56747 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC13.74□□□□□ -0.21
CLDN6P56747 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC13.74□□□□□ -0.21
CLDN6P56747 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC13.74□□□□□ -0.21
CLDN6P56747 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC13.74□□□□□ -0.21
CLDN6P56747 AC244197.1-201ENST00000456494 951 ntBASIC13.74□□□□□ -0.21
CLDN6P56747 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN6P56747 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.74□□□□□ -0.21
CLDN6P56747 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC13.74□□□□□ -0.21
CLDN6P56747 LINC00244-201ENST00000625073 613 ntBASIC13.74□□□□□ -0.21
CLDN6P56747 HELLS-212ENST00000630929 400 ntTSL 5 BASIC13.74□□□□□ -0.21
CLDN6P56747 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.74□□□□□ -0.21
CLDN6P56747 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN6P56747 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN6P56747 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN6P56747 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN6P56747 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN6P56747 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
CLDN6P56747 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CLDN6P56747 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN6P56747 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.74□□□□□ -0.21
CLDN6P56747 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN6P56747 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN6P56747 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN6P56747 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN6P56747 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN6P56747 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN6P56747 KHSRPP1-201ENST00000427983 1768 ntBASIC13.73□□□□□ -0.21
CLDN6P56747 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN6P56747 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN6P56747 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN6P56747 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
CLDN6P56747 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN6P56747 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC13.73□□□□□ -0.21
CLDN6P56747 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN6P56747 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC13.73□□□□□ -0.21
CLDN6P56747 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN6P56747 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.73□□□□□ -0.21
CLDN6P56747 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN6P56747 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN6P56747 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN6P56747 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC13.73□□□□□ -0.21
CLDN6P56747 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN6P56747 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CLDN6P56747 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CLDN6P56747 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN6P56747 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC13.73□□□□□ -0.21
CLDN6P56747 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.73□□□□□ -0.21
CLDN6P56747 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC13.73□□□□□ -0.21
CLDN6P56747 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN6P56747 RN7SL564P-201ENST00000496309 250 ntBASIC13.73□□□□□ -0.21
CLDN6P56747 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC13.73□□□□□ -0.21
CLDN6P56747 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC13.73□□□□□ -0.21
CLDN6P56747 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC13.73□□□□□ -0.21
CLDN6P56747 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC13.73□□□□□ -0.21
CLDN6P56747 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC13.73□□□□□ -0.21
CLDN6P56747 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC13.73□□□□□ -0.21
CLDN6P56747 GOLGA2P7-209ENST00000560408 745 ntBASIC13.73□□□□□ -0.21
CLDN6P56747 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC13.73□□□□□ -0.21
CLDN6P56747 ABHD17AP9-201ENST00000561925 548 ntBASIC13.73□□□□□ -0.21
CLDN6P56747 AP005264.6-204ENST00000588436 719 ntBASIC13.73□□□□□ -0.21
CLDN6P56747 AL021707.6-201ENST00000609212 491 ntBASIC13.73□□□□□ -0.21
CLDN6P56747 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC13.73□□□□□ -0.21
CLDN6P56747 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN6P56747 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CLDN6P56747 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN6P56747 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN6P56747 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN6P56747 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.73□□□□□ -0.21
CLDN6P56747 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN6P56747 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN6P56747 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.73□□□□□ -0.21
CLDN6P56747 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.73□□□□□ -0.21
CLDN6P56747 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.73□□□□□ -0.21
CLDN6P56747 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CLDN6P56747 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms