Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SUMO3P55854 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC12.97□□□□□ -0.33
SUMO3P55854 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
SUMO3P55854 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SUMO3P55854 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SUMO3P55854 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SUMO3P55854 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SUMO3P55854 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
SUMO3P55854 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SUMO3P55854 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
SUMO3P55854 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.96□□□□□ -0.33
SUMO3P55854 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SUMO3P55854 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SUMO3P55854 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
SUMO3P55854 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SUMO3P55854 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SUMO3P55854 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SUMO3P55854 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC12.96□□□□□ -0.33
SUMO3P55854 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC12.96□□□□□ -0.33
SUMO3P55854 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC12.96□□□□□ -0.33
SUMO3P55854 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC12.96□□□□□ -0.33
SUMO3P55854 SDHD-202ENST00000525291 790 ntTSL 3 BASIC12.96□□□□□ -0.33
SUMO3P55854 RERG-205ENST00000537647 935 ntTSL 2 BASIC12.96□□□□□ -0.33
SUMO3P55854 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC12.96□□□□□ -0.33
SUMO3P55854 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC12.96□□□□□ -0.33
SUMO3P55854 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC12.96□□□□□ -0.33
SUMO3P55854 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC12.96□□□□□ -0.33
SUMO3P55854 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.96□□□□□ -0.33
SUMO3P55854 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.96□□□□□ -0.33
SUMO3P55854 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SUMO3P55854 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SUMO3P55854 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SUMO3P55854 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
SUMO3P55854 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.96□□□□□ -0.34
SUMO3P55854 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
SUMO3P55854 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SUMO3P55854 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SUMO3P55854 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.34
SUMO3P55854 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.96□□□□□ -0.34
SUMO3P55854 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
SUMO3P55854 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SUMO3P55854 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SUMO3P55854 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
SUMO3P55854 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SUMO3P55854 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUMO3P55854 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.95□□□□□ -0.34
SUMO3P55854 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SUMO3P55854 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUMO3P55854 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUMO3P55854 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUMO3P55854 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUMO3P55854 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SUMO3P55854 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SUMO3P55854 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SUMO3P55854 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SUMO3P55854 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SUMO3P55854 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SUMO3P55854 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUMO3P55854 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUMO3P55854 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC12.95□□□□□ -0.34
SUMO3P55854 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
SUMO3P55854 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUMO3P55854 SDCCAG3P2-201ENST00000326105 1023 ntBASIC12.95□□□□□ -0.34
SUMO3P55854 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUMO3P55854 MIR769-201ENST00000390225 118 ntBASIC12.95□□□□□ -0.34
SUMO3P55854 BAX-205ENST00000391871 687 ntTSL 5 BASIC12.95□□□□□ -0.34
SUMO3P55854 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUMO3P55854 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUMO3P55854 DUX4L50-201ENST00000455245 715 ntBASIC12.95□□□□□ -0.34
SUMO3P55854 AC099548.2-209ENST00000480264 625 ntBASIC12.95□□□□□ -0.34
SUMO3P55854 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC12.95□□□□□ -0.34
SUMO3P55854 POU5F1P2-201ENST00000521750 823 ntBASIC12.95□□□□□ -0.34
SUMO3P55854 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.95□□□□□ -0.34
SUMO3P55854 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC12.95□□□□□ -0.34
SUMO3P55854 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUMO3P55854 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC12.95□□□□□ -0.34
SUMO3P55854 AL136379.1-201ENST00000623471 2642 ntBASIC12.95□□□□□ -0.34
SUMO3P55854 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUMO3P55854 RCC2P1-201ENST00000452257 1476 ntBASIC12.95□□□□□ -0.34
SUMO3P55854 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUMO3P55854 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUMO3P55854 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.95□□□□□ -0.34
SUMO3P55854 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
SUMO3P55854 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUMO3P55854 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
SUMO3P55854 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SUMO3P55854 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
SUMO3P55854 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUMO3P55854 AL157996.1-201ENST00000624684 2299 ntBASIC12.95□□□□□ -0.34
SUMO3P55854 BRD7P5-201ENST00000299197 1822 ntBASIC12.95□□□□□ -0.34
SUMO3P55854 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUMO3P55854 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUMO3P55854 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SUMO3P55854 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC12.94□□□□□ -0.34
SUMO3P55854 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SUMO3P55854 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SUMO3P55854 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
SUMO3P55854 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SUMO3P55854 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SUMO3P55854 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms