Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH8P55286 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH8P55286 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CDH8P55286 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
CDH8P55286 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH8P55286 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH8P55286 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH8P55286 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CDH8P55286 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH8P55286 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH8P55286 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC15.28■□□□□ 0.04
CDH8P55286 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH8P55286 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH8P55286 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH8P55286 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC15.28■□□□□ 0.04
CDH8P55286 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH8P55286 OR8T1P-201ENST00000421347 918 ntBASIC15.28■□□□□ 0.04
CDH8P55286 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC15.28■□□□□ 0.04
CDH8P55286 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH8P55286 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.28■□□□□ 0.04
CDH8P55286 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC15.28■□□□□ 0.04
CDH8P55286 CHMP4BP1-201ENST00000556017 588 ntBASIC15.28■□□□□ 0.04
CDH8P55286 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH8P55286 AL109837.1-201ENST00000603272 613 ntBASIC15.28■□□□□ 0.04
CDH8P55286 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH8P55286 MIR6769A-201ENST00000617340 73 ntBASIC15.28■□□□□ 0.04
CDH8P55286 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH8P55286 AC138627.1-207ENST00000641560 1006 ntBASIC15.28■□□□□ 0.04
CDH8P55286 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH8P55286 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH8P55286 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH8P55286 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH8P55286 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH8P55286 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.28■□□□□ 0.04
CDH8P55286 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.28■□□□□ 0.04
CDH8P55286 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH8P55286 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH8P55286 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC15.28■□□□□ 0.04
CDH8P55286 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH8P55286 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH8P55286 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH8P55286 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH8P55286 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH8P55286 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CDH8P55286 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH8P55286 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH8P55286 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CDH8P55286 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH8P55286 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CDH8P55286 AC007952.5-201ENST00000572818 1486 ntBASIC15.27■□□□□ 0.04
CDH8P55286 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC15.27■□□□□ 0.04
CDH8P55286 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH8P55286 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH8P55286 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH8P55286 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH8P55286 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH8P55286 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.27■□□□□ 0.04
CDH8P55286 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH8P55286 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH8P55286 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.27■□□□□ 0.04
CDH8P55286 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH8P55286 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH8P55286 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH8P55286 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH8P55286 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH8P55286 SLC25A24P2-201ENST00000415059 510 ntBASIC15.27■□□□□ 0.04
CDH8P55286 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC15.27■□□□□ 0.04
CDH8P55286 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH8P55286 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH8P55286 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH8P55286 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CDH8P55286 AC020922.3-201ENST00000595064 547 ntBASIC15.27■□□□□ 0.04
CDH8P55286 HPN-206ENST00000597419 1212 ntTSL 5 BASIC15.27■□□□□ 0.04
CDH8P55286 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH8P55286 CDK7-214ENST00000626796 358 ntTSL 5 BASIC15.27■□□□□ 0.04
CDH8P55286 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH8P55286 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC15.27■□□□□ 0.04
CDH8P55286 AC068587.10-201ENST00000641210 219 ntBASIC15.27■□□□□ 0.04
CDH8P55286 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH8P55286 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
CDH8P55286 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CDH8P55286 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH8P55286 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH8P55286 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH8P55286 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH8P55286 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CDH8P55286 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CDH8P55286 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CDH8P55286 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC15.27■□□□□ 0.03
CDH8P55286 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH8P55286 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH8P55286 USP39-220ENST00000613444 2161 ntTSL 2 BASIC15.26■□□□□ 0.03
CDH8P55286 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH8P55286 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CDH8P55286 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CDH8P55286 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH8P55286 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
CDH8P55286 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CDH8P55286 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.26■□□□□ 0.03
CDH8P55286 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms