Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BRPF1P55201 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC18.21■□□□□ 0.51
BRPF1P55201 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BRPF1P55201 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
BRPF1P55201 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
BRPF1P55201 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
BRPF1P55201 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BRPF1P55201 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BRPF1P55201 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BRPF1P55201 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BRPF1P55201 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC18.2■□□□□ 0.5
BRPF1P55201 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
BRPF1P55201 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BRPF1P55201 AC008132.1-202ENST00000342005 1389 ntBASIC18.2■□□□□ 0.5
BRPF1P55201 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
BRPF1P55201 AC117489.1-201ENST00000625169 3217 ntBASIC18.2■□□□□ 0.5
BRPF1P55201 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC18.2■□□□□ 0.5
BRPF1P55201 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BRPF1P55201 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
BRPF1P55201 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BRPF1P55201 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
BRPF1P55201 RPS9P1-201ENST00000419943 583 ntBASIC18.2■□□□□ 0.5
BRPF1P55201 KRT18P66-201ENST00000452970 1269 ntBASIC18.2■□□□□ 0.5
BRPF1P55201 CD164-210ENST00000512821 964 ntTSL 2 BASIC18.2■□□□□ 0.5
BRPF1P55201 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC18.2■□□□□ 0.5
BRPF1P55201 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC18.2■□□□□ 0.5
BRPF1P55201 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
BRPF1P55201 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC18.2■□□□□ 0.5
BRPF1P55201 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
BRPF1P55201 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
BRPF1P55201 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BRPF1P55201 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC18.2■□□□□ 0.5
BRPF1P55201 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
BRPF1P55201 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC18.2■□□□□ 0.5
BRPF1P55201 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC18.2■□□□□ 0.5
BRPF1P55201 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
BRPF1P55201 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BRPF1P55201 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
BRPF1P55201 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
BRPF1P55201 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BRPF1P55201 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC18.2■□□□□ 0.5
BRPF1P55201 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
BRPF1P55201 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
BRPF1P55201 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC18.19■□□□□ 0.5
BRPF1P55201 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRPF1P55201 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC18.19■□□□□ 0.5
BRPF1P55201 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BRPF1P55201 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC18.19■□□□□ 0.5
BRPF1P55201 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC18.19■□□□□ 0.5
BRPF1P55201 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC18.19■□□□□ 0.5
BRPF1P55201 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRPF1P55201 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BRPF1P55201 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRPF1P55201 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BRPF1P55201 RNA5SP359-201ENST00000364838 113 ntBASIC18.19■□□□□ 0.5
BRPF1P55201 NCR3-202ENST00000376071 541 ntTSL 5 BASIC18.19■□□□□ 0.5
BRPF1P55201 PARVG-202ENST00000415224 999 ntTSL 2 BASIC18.19■□□□□ 0.5
BRPF1P55201 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRPF1P55201 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRPF1P55201 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC18.19■□□□□ 0.5
BRPF1P55201 RN7SL530P-201ENST00000485097 298 ntBASIC18.19■□□□□ 0.5
BRPF1P55201 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BRPF1P55201 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC18.19■□□□□ 0.5
BRPF1P55201 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC18.19■□□□□ 0.5
BRPF1P55201 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC18.19■□□□□ 0.5
BRPF1P55201 DUT-208ENST00000559540 1441 ntTSL 2 BASIC18.19■□□□□ 0.5
BRPF1P55201 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
BRPF1P55201 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC18.19■□□□□ 0.5
BRPF1P55201 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC18.19■□□□□ 0.5
BRPF1P55201 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC18.19■□□□□ 0.5
BRPF1P55201 COX6A1P2-201ENST00000620597 330 ntBASIC18.19■□□□□ 0.5
BRPF1P55201 MIR600HG-201ENST00000449175 5984 ntBASIC18.19■□□□□ 0.5
BRPF1P55201 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
BRPF1P55201 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC18.19■□□□□ 0.5
BRPF1P55201 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
BRPF1P55201 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRPF1P55201 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRPF1P55201 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRPF1P55201 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRPF1P55201 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BRPF1P55201 AL590824.1-201ENST00000403828 1349 ntBASIC18.19■□□□□ 0.5
BRPF1P55201 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
BRPF1P55201 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRPF1P55201 GOLGA8IP-202ENST00000611635 2100 ntBASIC18.19■□□□□ 0.5
BRPF1P55201 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRPF1P55201 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
BRPF1P55201 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRPF1P55201 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BRPF1P55201 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRPF1P55201 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC18.18■□□□□ 0.5
BRPF1P55201 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRPF1P55201 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRPF1P55201 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRPF1P55201 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
BRPF1P55201 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRPF1P55201 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BRPF1P55201 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRPF1P55201 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC18.18■□□□□ 0.5
BRPF1P55201 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC18.18■□□□□ 0.5
BRPF1P55201 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms