Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
COL15A1P39059 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL15A1P39059 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL15A1P39059 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL15A1P39059 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL15A1P39059 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC17.88■□□□□ 0.45
COL15A1P39059 AC103592.1-201ENST00000394513 664 ntBASIC17.88■□□□□ 0.45
COL15A1P39059 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL15A1P39059 AC073210.1-201ENST00000414799 232 ntBASIC17.88■□□□□ 0.45
COL15A1P39059 AL512599.1-201ENST00000430724 685 ntBASIC17.88■□□□□ 0.45
COL15A1P39059 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC17.88■□□□□ 0.45
COL15A1P39059 RBM4-207ENST00000506523 654 ntTSL 3 BASIC17.88■□□□□ 0.45
COL15A1P39059 AC093300.1-201ENST00000510368 1201 ntBASIC17.88■□□□□ 0.45
COL15A1P39059 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC17.88■□□□□ 0.45
COL15A1P39059 GDNF-207ENST00000515058 764 ntTSL 5 BASIC17.88■□□□□ 0.45
COL15A1P39059 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC17.88■□□□□ 0.45
COL15A1P39059 DLK1-205ENST00000556051 469 ntTSL 2 BASIC17.88■□□□□ 0.45
COL15A1P39059 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC17.88■□□□□ 0.45
COL15A1P39059 AL031673.1-201ENST00000611460 466 ntBASIC17.88■□□□□ 0.45
COL15A1P39059 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL15A1P39059 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL15A1P39059 AL022313.4-201ENST00000562756 2046 ntBASIC17.88■□□□□ 0.45
COL15A1P39059 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL15A1P39059 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL15A1P39059 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC17.88■□□□□ 0.45
COL15A1P39059 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
COL15A1P39059 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
COL15A1P39059 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL15A1P39059 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
COL15A1P39059 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
COL15A1P39059 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL15A1P39059 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
COL15A1P39059 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL15A1P39059 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC17.87■□□□□ 0.45
COL15A1P39059 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL15A1P39059 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.87■□□□□ 0.45
COL15A1P39059 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL15A1P39059 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL15A1P39059 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC17.87■□□□□ 0.45
COL15A1P39059 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
COL15A1P39059 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL15A1P39059 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC17.87■□□□□ 0.45
COL15A1P39059 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC17.87■□□□□ 0.45
COL15A1P39059 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL15A1P39059 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL15A1P39059 GEMIN8P4-201ENST00000380526 729 ntBASIC17.87■□□□□ 0.45
COL15A1P39059 USP17L6P-201ENST00000382470 1197 ntBASIC17.87■□□□□ 0.45
COL15A1P39059 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
COL15A1P39059 ACTBP7-201ENST00000418351 1124 ntBASIC17.87■□□□□ 0.45
COL15A1P39059 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
COL15A1P39059 HLA-DPA2-205ENST00000433582 733 ntBASIC17.87■□□□□ 0.45
COL15A1P39059 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL15A1P39059 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC17.87■□□□□ 0.45
COL15A1P39059 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC17.87■□□□□ 0.45
COL15A1P39059 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
COL15A1P39059 AC083801.1-201ENST00000491689 358 ntBASIC17.87■□□□□ 0.45
COL15A1P39059 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC17.87■□□□□ 0.45
COL15A1P39059 AL160191.2-201ENST00000603975 601 ntBASIC17.87■□□□□ 0.45
COL15A1P39059 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC17.87■□□□□ 0.45
COL15A1P39059 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC17.87■□□□□ 0.45
COL15A1P39059 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC17.87■□□□□ 0.45
COL15A1P39059 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC17.87■□□□□ 0.45
COL15A1P39059 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.87■□□□□ 0.45
COL15A1P39059 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
COL15A1P39059 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
COL15A1P39059 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL15A1P39059 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.87■□□□□ 0.45
COL15A1P39059 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL15A1P39059 RPL13AP3-202ENST00000494676 1473 ntBASIC17.87■□□□□ 0.45
COL15A1P39059 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC17.87■□□□□ 0.45
COL15A1P39059 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL15A1P39059 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL15A1P39059 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL15A1P39059 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL15A1P39059 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL15A1P39059 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL15A1P39059 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL15A1P39059 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COL15A1P39059 GOLGA8UP-201ENST00000527159 1755 ntBASIC17.86■□□□□ 0.45
COL15A1P39059 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL15A1P39059 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COL15A1P39059 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL15A1P39059 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC17.86■□□□□ 0.45
COL15A1P39059 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL15A1P39059 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC17.86■□□□□ 0.45
COL15A1P39059 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL15A1P39059 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL15A1P39059 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
COL15A1P39059 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC17.86■□□□□ 0.45
COL15A1P39059 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC17.86■□□□□ 0.45
COL15A1P39059 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
COL15A1P39059 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC17.86■□□□□ 0.45
COL15A1P39059 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL15A1P39059 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC17.86■□□□□ 0.45
COL15A1P39059 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC17.86■□□□□ 0.45
COL15A1P39059 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL15A1P39059 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC17.86■□□□□ 0.45
COL15A1P39059 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC17.86■□□□□ 0.45
COL15A1P39059 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC17.86■□□□□ 0.45
COL15A1P39059 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms