Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
RAB3BP20337 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB3BP20337 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB3BP20337 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB3BP20337 WRB-204ENST00000398753 699 ntTSL 3 BASIC12.65□□□□□ -0.38
RAB3BP20337 ARSEP1-201ENST00000420443 635 ntBASIC12.65□□□□□ -0.38
RAB3BP20337 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC12.65□□□□□ -0.38
RAB3BP20337 KLF2P3-201ENST00000451977 1087 ntBASIC12.65□□□□□ -0.38
RAB3BP20337 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RAB3BP20337 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.65□□□□□ -0.38
RAB3BP20337 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC12.65□□□□□ -0.38
RAB3BP20337 SPDYE18-201ENST00000510091 1050 ntBASIC12.65□□□□□ -0.38
RAB3BP20337 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.65□□□□□ -0.38
RAB3BP20337 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.65□□□□□ -0.38
RAB3BP20337 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.65□□□□□ -0.38
RAB3BP20337 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC12.65□□□□□ -0.38
RAB3BP20337 AC140878.1-201ENST00000565277 250 ntBASIC12.65□□□□□ -0.38
RAB3BP20337 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.65□□□□□ -0.38
RAB3BP20337 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.65□□□□□ -0.38
RAB3BP20337 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.65□□□□□ -0.38
RAB3BP20337 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC12.65□□□□□ -0.38
RAB3BP20337 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.65□□□□□ -0.38
RAB3BP20337 AC138696.2-201ENST00000607376 223 ntBASIC12.65□□□□□ -0.38
RAB3BP20337 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RAB3BP20337 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
RAB3BP20337 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB3BP20337 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB3BP20337 LINC00567-201ENST00000569854 3409 ntBASIC12.65□□□□□ -0.38
RAB3BP20337 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.65□□□□□ -0.38
RAB3BP20337 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
RAB3BP20337 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB3BP20337 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB3BP20337 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RAB3BP20337 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12.65□□□□□ -0.38
RAB3BP20337 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC12.65□□□□□ -0.38
RAB3BP20337 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RAB3BP20337 AC005014.1-201ENST00000432006 2976 ntBASIC12.65□□□□□ -0.38
RAB3BP20337 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
RAB3BP20337 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
RAB3BP20337 TNRC18P1-201ENST00000502875 3650 ntBASIC12.65□□□□□ -0.39
RAB3BP20337 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
RAB3BP20337 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
RAB3BP20337 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
RAB3BP20337 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
RAB3BP20337 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.65□□□□□ -0.39
RAB3BP20337 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB3BP20337 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC12.64□□□□□ -0.39
RAB3BP20337 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
RAB3BP20337 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB3BP20337 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
RAB3BP20337 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.64□□□□□ -0.39
RAB3BP20337 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB3BP20337 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RAB3BP20337 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RAB3BP20337 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB3BP20337 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RAB3BP20337 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RAB3BP20337 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
RAB3BP20337 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RAB3BP20337 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB3BP20337 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RAB3BP20337 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB3BP20337 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.64□□□□□ -0.39
RAB3BP20337 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
RAB3BP20337 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB3BP20337 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
RAB3BP20337 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RAB3BP20337 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
RAB3BP20337 ABCD1P2-201ENST00000429313 1601 ntBASIC12.64□□□□□ -0.39
RAB3BP20337 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB3BP20337 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB3BP20337 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB3BP20337 C1QBPP1-201ENST00000400117 770 ntBASIC12.64□□□□□ -0.39
RAB3BP20337 ACTBP8-201ENST00000403258 1108 ntBASIC12.64□□□□□ -0.39
RAB3BP20337 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
RAB3BP20337 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC12.64□□□□□ -0.39
RAB3BP20337 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.64□□□□□ -0.39
RAB3BP20337 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.64□□□□□ -0.39
RAB3BP20337 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB3BP20337 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.64□□□□□ -0.39
RAB3BP20337 ARL16-202ENST00000570561 768 ntTSL 2 BASIC12.64□□□□□ -0.39
RAB3BP20337 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.64□□□□□ -0.39
RAB3BP20337 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RAB3BP20337 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.64□□□□□ -0.39
RAB3BP20337 AL590560.3-201ENST00000623350 461 ntBASIC12.64□□□□□ -0.39
RAB3BP20337 Z92544.3-201ENST00000624747 417 ntBASIC12.64□□□□□ -0.39
RAB3BP20337 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC12.64□□□□□ -0.39
RAB3BP20337 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RAB3BP20337 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB3BP20337 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
RAB3BP20337 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB3BP20337 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.64□□□□□ -0.39
RAB3BP20337 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB3BP20337 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB3BP20337 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB3BP20337 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.64□□□□□ -0.39
RAB3BP20337 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RAB3BP20337 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RAB3BP20337 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RAB3BP20337 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms