Protein–RNA interactions for Protein: P0CJ79

ZNF888, Zinc finger protein 888, humanhuman

Predicted RBP Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF888P0CJ79 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
ZNF888P0CJ79 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC13.63□□□□□ -0.23
ZNF888P0CJ79 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF888P0CJ79 AC090643.2-201ENST00000623442 2029 ntBASIC13.63□□□□□ -0.23
ZNF888P0CJ79 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF888P0CJ79 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF888P0CJ79 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF888P0CJ79 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF888P0CJ79 RNA5SP359-201ENST00000364838 113 ntBASIC13.63□□□□□ -0.23
ZNF888P0CJ79 NCR3-202ENST00000376071 541 ntTSL 5 BASIC13.63□□□□□ -0.23
ZNF888P0CJ79 ACTG1P2-201ENST00000415776 1125 ntBASIC13.63□□□□□ -0.23
ZNF888P0CJ79 ACTG1P11-201ENST00000425411 1125 ntBASIC13.63□□□□□ -0.23
ZNF888P0CJ79 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF888P0CJ79 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13.63□□□□□ -0.23
ZNF888P0CJ79 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC13.63□□□□□ -0.23
ZNF888P0CJ79 SPTLC1P5-201ENST00000450718 252 ntBASIC13.63□□□□□ -0.23
ZNF888P0CJ79 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF888P0CJ79 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.63□□□□□ -0.23
ZNF888P0CJ79 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC13.63□□□□□ -0.23
ZNF888P0CJ79 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC13.63□□□□□ -0.23
ZNF888P0CJ79 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC13.63□□□□□ -0.23
ZNF888P0CJ79 ACTG1P17-201ENST00000558391 1119 ntBASIC13.63□□□□□ -0.23
ZNF888P0CJ79 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF888P0CJ79 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.63□□□□□ -0.23
ZNF888P0CJ79 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF888P0CJ79 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF888P0CJ79 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF888P0CJ79 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF888P0CJ79 LINC01165-201ENST00000445190 1623 ntBASIC13.63□□□□□ -0.23
ZNF888P0CJ79 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
ZNF888P0CJ79 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF888P0CJ79 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF888P0CJ79 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
ZNF888P0CJ79 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
ZNF888P0CJ79 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.63□□□□□ -0.23
ZNF888P0CJ79 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.63□□□□□ -0.23
ZNF888P0CJ79 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF888P0CJ79 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF888P0CJ79 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF888P0CJ79 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF888P0CJ79 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.63□□□□□ -0.23
ZNF888P0CJ79 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF888P0CJ79 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.63□□□□□ -0.23
ZNF888P0CJ79 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF888P0CJ79 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 CYP46A4P-201ENST00000414953 267 ntBASIC13.62□□□□□ -0.23
ZNF888P0CJ79 AL008707.1-201ENST00000422498 534 ntBASIC13.62□□□□□ -0.23
ZNF888P0CJ79 RN7SL11P-201ENST00000471305 293 ntBASIC13.62□□□□□ -0.23
ZNF888P0CJ79 AL512310.5-201ENST00000551999 515 ntBASIC13.62□□□□□ -0.23
ZNF888P0CJ79 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 RN7SL774P-201ENST00000577467 290 ntBASIC13.62□□□□□ -0.23
ZNF888P0CJ79 MIR3188-201ENST00000583494 85 ntBASIC13.62□□□□□ -0.23
ZNF888P0CJ79 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 LINC00115-201ENST00000473798 1317 ntBASIC13.62□□□□□ -0.23
ZNF888P0CJ79 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF888P0CJ79 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF888P0CJ79 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.61□□□□□ -0.23
ZNF888P0CJ79 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF888P0CJ79 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF888P0CJ79 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms