Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 AC092978.1-202ENST00000637590 1327 ntBASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 MARK2P16-201ENST00000605714 1723 ntBASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.56□□□□□ -0.24
RAB40ALP0C0E4 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 AP002353.1-201ENST00000528257 1599 ntBASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 RPSAP31-201ENST00000416648 895 ntBASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 NAGK-204ENST00000443872 878 ntTSL 3 BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 FTH1P22-201ENST00000456305 520 ntBASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 FOS-204ENST00000554617 796 ntTSL 2 BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40ALP0C0E4 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 HSPA7-201ENST00000445535 1927 ntBASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms