Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD74P04233 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC12.1□□□□□ -0.47
CD74P04233 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD74P04233 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD74P04233 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD74P04233 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD74P04233 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
CD74P04233 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CD74P04233 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD74P04233 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CD74P04233 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CD74P04233 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC12.1□□□□□ -0.47
CD74P04233 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.1□□□□□ -0.47
CD74P04233 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD74P04233 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD74P04233 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD74P04233 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CD74P04233 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD74P04233 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD74P04233 CALY-202ENST00000368555 783 ntTSL 2 BASIC12.1□□□□□ -0.47
CD74P04233 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD74P04233 METTL26-204ENST00000397665 558 ntTSL 2 BASIC12.1□□□□□ -0.47
CD74P04233 POM121L8P-201ENST00000417732 1281 ntBASIC12.1□□□□□ -0.47
CD74P04233 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12.1□□□□□ -0.47
CD74P04233 AL442647.2-201ENST00000429864 857 ntBASIC12.1□□□□□ -0.47
CD74P04233 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.1□□□□□ -0.47
CD74P04233 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.1□□□□□ -0.47
CD74P04233 POM121L9P-203ENST00000441984 1285 ntBASIC12.1□□□□□ -0.47
CD74P04233 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CD74P04233 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD74P04233 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC12.1□□□□□ -0.47
CD74P04233 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.1□□□□□ -0.47
CD74P04233 AC023310.3-201ENST00000557027 670 ntBASIC12.1□□□□□ -0.47
CD74P04233 AC100756.1-201ENST00000562736 682 ntBASIC12.1□□□□□ -0.47
CD74P04233 AC138749.3-201ENST00000567691 622 ntBASIC12.1□□□□□ -0.47
CD74P04233 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.1□□□□□ -0.47
CD74P04233 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CD74P04233 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC12.1□□□□□ -0.47
CD74P04233 AC009955.4-201ENST00000597192 544 ntBASIC12.1□□□□□ -0.47
CD74P04233 AC027612.4-201ENST00000605371 583 ntBASIC12.1□□□□□ -0.47
CD74P04233 AC116165.1-201ENST00000611806 668 ntBASIC12.1□□□□□ -0.47
CD74P04233 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.1□□□□□ -0.47
CD74P04233 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CD74P04233 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD74P04233 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD74P04233 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
CD74P04233 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD74P04233 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD74P04233 AP000593.2-201ENST00000542775 1433 ntBASIC12.1□□□□□ -0.47
CD74P04233 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CD74P04233 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC12.1□□□□□ -0.47
CD74P04233 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
CD74P04233 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CD74P04233 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CD74P04233 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CD74P04233 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD74P04233 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD74P04233 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD74P04233 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CD74P04233 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD74P04233 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC12.09□□□□□ -0.47
CD74P04233 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD74P04233 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD74P04233 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.09□□□□□ -0.47
CD74P04233 AC061965.1-201ENST00000560524 1465 ntBASIC12.09□□□□□ -0.47
CD74P04233 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD74P04233 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD74P04233 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC12.09□□□□□ -0.47
CD74P04233 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD74P04233 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CD74P04233 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CD74P04233 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.09□□□□□ -0.47
CD74P04233 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD74P04233 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD74P04233 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC12.09□□□□□ -0.47
CD74P04233 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD74P04233 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
CD74P04233 ACKR1-201ENST00000368121 1240 ntBASIC12.09□□□□□ -0.47
CD74P04233 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.09□□□□□ -0.47
CD74P04233 SOCS2P1-201ENST00000417727 557 ntBASIC12.09□□□□□ -0.47
CD74P04233 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.09□□□□□ -0.47
CD74P04233 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC12.09□□□□□ -0.47
CD74P04233 MYCLP2-201ENST00000449268 967 ntBASIC12.09□□□□□ -0.47
CD74P04233 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.09□□□□□ -0.47
CD74P04233 KRT18P15-201ENST00000458108 1291 ntBASIC12.09□□□□□ -0.47
CD74P04233 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD74P04233 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.09□□□□□ -0.47
CD74P04233 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
CD74P04233 TPRX2P-201ENST00000535362 881 ntBASIC12.09□□□□□ -0.47
CD74P04233 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC12.09□□□□□ -0.47
CD74P04233 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD74P04233 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC12.09□□□□□ -0.47
CD74P04233 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.09□□□□□ -0.47
CD74P04233 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CD74P04233 AC008738.7-201ENST00000609744 511 ntBASIC12.09□□□□□ -0.47
CD74P04233 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD74P04233 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.09□□□□□ -0.47
CD74P04233 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CD74P04233 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.09□□□□□ -0.47
CD74P04233 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms