Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
APOC3P02656 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC11.47□□□□□ -0.57
APOC3P02656 AC002550.1-201ENST00000565916 1379 ntTSL 5 BASIC11.47□□□□□ -0.57
APOC3P02656 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
APOC3P02656 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
APOC3P02656 CRAT-202ENST00000393384 973 ntTSL 2 BASIC11.47□□□□□ -0.57
APOC3P02656 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC11.47□□□□□ -0.57
APOC3P02656 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
APOC3P02656 AC112907.2-201ENST00000448639 330 ntBASIC11.47□□□□□ -0.57
APOC3P02656 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC11.47□□□□□ -0.57
APOC3P02656 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC11.47□□□□□ -0.57
APOC3P02656 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC11.47□□□□□ -0.57
APOC3P02656 AC015910.1-201ENST00000579400 975 ntBASIC11.47□□□□□ -0.57
APOC3P02656 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC11.47□□□□□ -0.57
APOC3P02656 TRIM37-203ENST00000393066 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
APOC3P02656 LINC-PINT-208ENST00000451786 3505 ntTSL 2 BASIC11.47□□□□□ -0.57
APOC3P02656 NUAK2-201ENST00000367157 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
APOC3P02656 PITX2-202ENST00000354925 3359 ntAPPRIS ALT1 TSL 2 BASIC11.47□□□□□ -0.57
APOC3P02656 TMEM132D-201ENST00000389441 5305 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
APOC3P02656 MTHFSD-201ENST00000360900 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
APOC3P02656 CLEC4F-201ENST00000272367 2475 ntAPPRIS P3 TSL 2 BASIC11.47□□□□□ -0.57
APOC3P02656 ELMOD3-203ENST00000409013 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
APOC3P02656 C5orf15-201ENST00000231512 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
APOC3P02656 AC080128.2-201ENST00000641520 11863 ntBASIC11.47□□□□□ -0.57
APOC3P02656 PCDHAC1-201ENST00000253807 5299 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
APOC3P02656 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
APOC3P02656 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC11.47□□□□□ -0.57
APOC3P02656 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC11.47□□□□□ -0.57
APOC3P02656 ATP8A1-202ENST00000381668 8270 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
APOC3P02656 GLT8D2-201ENST00000360814 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
APOC3P02656 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC11.46□□□□□ -0.57
APOC3P02656 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
APOC3P02656 DBF4B-202ENST00000393547 1810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
APOC3P02656 Z97192.3-201ENST00000420902 2975 ntTSL 2 BASIC11.46□□□□□ -0.57
APOC3P02656 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC11.46□□□□□ -0.57
APOC3P02656 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
APOC3P02656 CLDN19-201ENST00000296387 2859 ntTSL 2 BASIC11.46□□□□□ -0.57
APOC3P02656 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
APOC3P02656 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC11.46□□□□□ -0.57
APOC3P02656 NBR1-202ENST00000542611 2703 ntTSL 2 BASIC11.46□□□□□ -0.57
APOC3P02656 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC11.46□□□□□ -0.57
APOC3P02656 LINC02202-201ENST00000499583 2664 ntTSL 2 BASIC11.46□□□□□ -0.57
APOC3P02656 WWP2-202ENST00000359154 4515 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
APOC3P02656 ABL2-202ENST00000367623 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
APOC3P02656 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
APOC3P02656 FAM200B-223ENST00000622362 4377 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
APOC3P02656 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
APOC3P02656 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
APOC3P02656 INO80-211ENST00000616814 4272 ntTSL 5 BASIC11.46□□□□□ -0.57
APOC3P02656 SPCS1-206ENST00000619898 4254 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
APOC3P02656 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
APOC3P02656 ABLIM3-203ENST00000356541 2290 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
APOC3P02656 ABLIM3-211ENST00000517451 2287 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
APOC3P02656 DERL3-203ENST00000404056 3113 ntTSL 5 BASIC11.46□□□□□ -0.57
APOC3P02656 PACRG-AS1-201ENST00000626335 2192 ntTSL 2 BASIC11.46□□□□□ -0.57
APOC3P02656 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
APOC3P02656 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
APOC3P02656 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC11.46□□□□□ -0.57
APOC3P02656 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC11.46□□□□□ -0.57
APOC3P02656 AZGP1P1-201ENST00000411909 902 ntBASIC11.46□□□□□ -0.57
APOC3P02656 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
APOC3P02656 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC11.46□□□□□ -0.57
APOC3P02656 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
APOC3P02656 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
APOC3P02656 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC11.46□□□□□ -0.57
APOC3P02656 PNN-202ENST00000553331 656 ntTSL 3 BASIC11.46□□□□□ -0.57
APOC3P02656 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC11.46□□□□□ -0.57
APOC3P02656 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC11.46□□□□□ -0.57
APOC3P02656 AL031432.2-201ENST00000566714 459 ntBASIC11.46□□□□□ -0.57
APOC3P02656 JPT2-214ENST00000569765 782 ntTSL 2 BASIC11.46□□□□□ -0.57
APOC3P02656 AL928711.1-201ENST00000570165 459 ntBASIC11.46□□□□□ -0.57
APOC3P02656 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC11.46□□□□□ -0.57
APOC3P02656 UBL5-208ENST00000593087 320 ntTSL 3 BASIC11.46□□□□□ -0.57
APOC3P02656 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
APOC3P02656 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC11.46□□□□□ -0.57
APOC3P02656 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC11.46□□□□□ -0.57
APOC3P02656 FOSB-206ENST00000586615 3774 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
APOC3P02656 EFL1-201ENST00000268206 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
APOC3P02656 MTRF1L-203ENST00000367233 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
APOC3P02656 AC006033.2-201ENST00000609522 1968 ntTSL 2 BASIC11.46□□□□□ -0.58
APOC3P02656 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
APOC3P02656 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
APOC3P02656 ATAD5-201ENST00000321990 6869 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
APOC3P02656 ARRDC3-AS1-201ENST00000625713 2500 ntTSL 2 BASIC11.46□□□□□ -0.58
APOC3P02656 Z97192.1-201ENST00000391625 3894 ntTSL 2 BASIC11.46□□□□□ -0.58
APOC3P02656 REPS1-205ENST00000415951 2424 ntTSL 5 BASIC11.46□□□□□ -0.58
APOC3P02656 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC11.46□□□□□ -0.58
APOC3P02656 NSD2-205ENST00000382892 7706 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
APOC3P02656 C1GALT1-205ENST00000436587 6235 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
APOC3P02656 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
APOC3P02656 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
APOC3P02656 AL590440.2-201ENST00000641973 1595 ntBASIC11.45□□□□□ -0.58
APOC3P02656 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
APOC3P02656 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
APOC3P02656 AC080013.1-204ENST00000607426 2185 ntBASIC11.45□□□□□ -0.58
APOC3P02656 PLEKHA6-205ENST00000637508 5704 ntTSL 5 BASIC11.45□□□□□ -0.58
APOC3P02656 MADD-209ENST00000406482 5614 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
APOC3P02656 IKBKE-203ENST00000581977 3221 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
APOC3P02656 ACSF3-218ENST00000614302 3751 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
APOC3P02656 ADAMTS20-201ENST00000389420 6076 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms