Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LTAP01374 GHET1-201ENST00000627071 1906 ntBASIC10.85□□□□□ -0.67
LTAP01374 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC10.85□□□□□ -0.67
LTAP01374 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LTAP01374 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LTAP01374 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LTAP01374 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LTAP01374 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LTAP01374 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC10.85□□□□□ -0.67
LTAP01374 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LTAP01374 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
LTAP01374 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
LTAP01374 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LTAP01374 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC10.85□□□□□ -0.67
LTAP01374 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
LTAP01374 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC10.84□□□□□ -0.67
LTAP01374 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LTAP01374 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC10.84□□□□□ -0.67
LTAP01374 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
LTAP01374 AP000593.2-201ENST00000542775 1433 ntBASIC10.84□□□□□ -0.67
LTAP01374 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC10.84□□□□□ -0.67
LTAP01374 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LTAP01374 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LTAP01374 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
LTAP01374 AC108024.1-201ENST00000626286 1721 ntBASIC10.84□□□□□ -0.67
LTAP01374 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC10.84□□□□□ -0.67
LTAP01374 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
LTAP01374 AC073862.5-201ENST00000624129 2027 ntBASIC10.84□□□□□ -0.67
LTAP01374 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
LTAP01374 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC10.84□□□□□ -0.67
LTAP01374 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
LTAP01374 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LTAP01374 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LTAP01374 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LTAP01374 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LTAP01374 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
LTAP01374 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LTAP01374 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LTAP01374 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LTAP01374 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
LTAP01374 ACKR1-201ENST00000368121 1240 ntBASIC10.84□□□□□ -0.67
LTAP01374 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
LTAP01374 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC10.84□□□□□ -0.67
LTAP01374 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LTAP01374 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LTAP01374 UPF3AP3-201ENST00000420996 769 ntBASIC10.84□□□□□ -0.67
LTAP01374 TSEN15P1-201ENST00000423257 515 ntBASIC10.84□□□□□ -0.67
LTAP01374 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC10.84□□□□□ -0.67
LTAP01374 COX10-202ENST00000429152 875 ntTSL 2 BASIC10.84□□□□□ -0.67
LTAP01374 GAS5-209ENST00000430245 723 ntTSL 3 BASIC10.84□□□□□ -0.67
LTAP01374 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC10.84□□□□□ -0.67
LTAP01374 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC10.84□□□□□ -0.67
LTAP01374 FTLP10-202ENST00000505798 471 ntBASIC10.84□□□□□ -0.67
LTAP01374 DOC2GP-202ENST00000514950 1163 ntBASIC10.84□□□□□ -0.67
LTAP01374 AC068587.3-201ENST00000526613 355 ntBASIC10.84□□□□□ -0.67
LTAP01374 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
LTAP01374 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC10.84□□□□□ -0.67
LTAP01374 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC10.84□□□□□ -0.67
LTAP01374 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC10.84□□□□□ -0.67
LTAP01374 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
LTAP01374 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC10.84□□□□□ -0.67
LTAP01374 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LTAP01374 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LTAP01374 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LTAP01374 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC10.84□□□□□ -0.67
LTAP01374 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC10.84□□□□□ -0.67
LTAP01374 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LTAP01374 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC10.84□□□□□ -0.67
LTAP01374 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LTAP01374 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LTAP01374 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC10.84□□□□□ -0.67
LTAP01374 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LTAP01374 AGGF1P10-201ENST00000635005 2191 ntBASIC10.84□□□□□ -0.67
LTAP01374 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LTAP01374 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LTAP01374 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
LTAP01374 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LTAP01374 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LTAP01374 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LTAP01374 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LTAP01374 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LTAP01374 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
LTAP01374 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LTAP01374 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LTAP01374 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC10.84□□□□□ -0.67
LTAP01374 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.67
LTAP01374 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.67
LTAP01374 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
LTAP01374 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC10.83□□□□□ -0.68
LTAP01374 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
LTAP01374 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LTAP01374 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LTAP01374 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LTAP01374 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LTAP01374 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC10.83□□□□□ -0.68
LTAP01374 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LTAP01374 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC10.83□□□□□ -0.68
LTAP01374 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LTAP01374 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LTAP01374 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms