Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC11.78□□□□□ -0.52
SSSCA1O60232 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC11.78□□□□□ -0.52
SSSCA1O60232 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC11.78□□□□□ -0.52
SSSCA1O60232 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC11.78□□□□□ -0.52
SSSCA1O60232 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC11.78□□□□□ -0.52
SSSCA1O60232 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SSSCA1O60232 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SSSCA1O60232 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC11.78□□□□□ -0.52
SSSCA1O60232 AL662799.1-202ENST00000614205 422 ntBASIC11.78□□□□□ -0.52
SSSCA1O60232 AL136317.3-201ENST00000618497 906 ntBASIC11.78□□□□□ -0.52
SSSCA1O60232 AP001002.3-201ENST00000623482 206 ntBASIC11.78□□□□□ -0.52
SSSCA1O60232 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
SSSCA1O60232 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SSSCA1O60232 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SSSCA1O60232 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
SSSCA1O60232 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
SSSCA1O60232 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SSSCA1O60232 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC11.78□□□□□ -0.52
SSSCA1O60232 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC11.78□□□□□ -0.52
SSSCA1O60232 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC11.78□□□□□ -0.52
SSSCA1O60232 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SSSCA1O60232 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC11.78□□□□□ -0.52
SSSCA1O60232 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SSSCA1O60232 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
SSSCA1O60232 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
SSSCA1O60232 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SSSCA1O60232 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
SSSCA1O60232 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC11.77□□□□□ -0.52
SSSCA1O60232 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
SSSCA1O60232 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SSSCA1O60232 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSSCA1O60232 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
SSSCA1O60232 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SSSCA1O60232 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
SSSCA1O60232 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SSSCA1O60232 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
SSSCA1O60232 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SSSCA1O60232 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC11.77□□□□□ -0.53
SSSCA1O60232 FABP5-202ENST00000396359 986 ntTSL 5 BASIC11.77□□□□□ -0.53
SSSCA1O60232 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSSCA1O60232 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SSSCA1O60232 AC136604.1-202ENST00000425471 771 ntBASIC11.77□□□□□ -0.53
SSSCA1O60232 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC11.77□□□□□ -0.53
SSSCA1O60232 FO681548.1-201ENST00000455617 1132 ntBASIC11.77□□□□□ -0.53
SSSCA1O60232 SPDYE18-201ENST00000510091 1050 ntBASIC11.77□□□□□ -0.53
SSSCA1O60232 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC11.77□□□□□ -0.53
SSSCA1O60232 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC11.77□□□□□ -0.53
SSSCA1O60232 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC11.77□□□□□ -0.53
SSSCA1O60232 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC11.77□□□□□ -0.53
SSSCA1O60232 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC11.77□□□□□ -0.53
SSSCA1O60232 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC11.77□□□□□ -0.53
SSSCA1O60232 DAD1-205ENST00000543337 501 ntTSL 3 BASIC11.77□□□□□ -0.53
SSSCA1O60232 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC11.77□□□□□ -0.53
SSSCA1O60232 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SSSCA1O60232 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC11.77□□□□□ -0.53
SSSCA1O60232 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC11.77□□□□□ -0.53
SSSCA1O60232 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC11.77□□□□□ -0.53
SSSCA1O60232 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSSCA1O60232 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SSSCA1O60232 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
SSSCA1O60232 AL445250.1-201ENST00000641671 2259 ntBASIC11.77□□□□□ -0.53
SSSCA1O60232 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSSCA1O60232 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
SSSCA1O60232 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
SSSCA1O60232 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SSSCA1O60232 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SSSCA1O60232 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
SSSCA1O60232 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
SSSCA1O60232 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
SSSCA1O60232 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SSSCA1O60232 DLX4-206ENST00000611342 1662 ntBASIC11.77□□□□□ -0.53
SSSCA1O60232 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SSSCA1O60232 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSSCA1O60232 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSSCA1O60232 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC11.77□□□□□ -0.53
SSSCA1O60232 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSSCA1O60232 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SSSCA1O60232 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC11.76□□□□□ -0.53
SSSCA1O60232 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
SSSCA1O60232 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSSCA1O60232 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC11.76□□□□□ -0.53
SSSCA1O60232 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSSCA1O60232 POM121L14P-201ENST00000406100 1558 ntBASIC11.76□□□□□ -0.53
SSSCA1O60232 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
SSSCA1O60232 INTS4P2-202ENST00000614726 2019 ntBASIC11.76□□□□□ -0.53
SSSCA1O60232 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSSCA1O60232 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSSCA1O60232 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC11.76□□□□□ -0.53
SSSCA1O60232 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSSCA1O60232 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SSSCA1O60232 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC11.76□□□□□ -0.53
SSSCA1O60232 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC11.76□□□□□ -0.53
SSSCA1O60232 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
SSSCA1O60232 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
SSSCA1O60232 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSSCA1O60232 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSSCA1O60232 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC11.76□□□□□ -0.53
SSSCA1O60232 COA5-202ENST00000409997 557 ntTSL 4 BASIC11.76□□□□□ -0.53
SSSCA1O60232 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC11.76□□□□□ -0.53
SSSCA1O60232 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms