Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.14□□□□□ -0.31
NPIPA2E9PIF3 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 AC015802.1-201ENST00000588104 1449 ntBASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 TBC1D3J-201ENST00000620719 1426 ntBASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 NCR3-202ENST00000376071 541 ntTSL 5 BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 PARVG-202ENST00000415224 999 ntTSL 2 BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 AC242376.1-201ENST00000559033 726 ntBASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 BX640514.1-201ENST00000583223 1918 ntBASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 FRMPD2B-201ENST00000431305 1347 ntBASIC13.13□□□□□ -0.31
NPIPA2E9PIF3 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 AC006504.5-208ENST00000588784 2401 ntBASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 AL590440.2-201ENST00000641973 1595 ntBASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 CEP164P1-201ENST00000455142 418 ntBASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 AC008723.1-201ENST00000506922 207 ntBASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 MIR4706-201ENST00000582134 82 ntBASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 AC006453.1-201ENST00000636037 1257 ntBASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 AC018629.1-201ENST00000623381 1736 ntBASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms