Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 SFPQP1-201ENST00000446621 1786 ntBASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC16.26■□□□□ 0.19
TMEM88BA6NKF7 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 SFTPA2-202ENST00000372327 815 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 AC103592.1-201ENST00000394513 664 ntBASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 TUBB8P9-201ENST00000422534 1276 ntBASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 IQCF4-203ENST00000428561 420 ntBASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 TUBB8P10-201ENST00000430210 1279 ntBASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 HNRNPA1P3-201ENST00000440968 551 ntBASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 SRP9P1-201ENST00000445874 261 ntBASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 AC004923.1-201ENST00000527543 776 ntTSL 5 BASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 AC239600.1-201ENST00000603201 462 ntBASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM88BA6NKF7 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 HSD3BP1-201ENST00000286193 1111 ntBASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 TEX38-201ENST00000334122 866 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 SNU13-204ENST00000402458 462 ntTSL 3 BASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 SSR1P1-201ENST00000407630 814 ntBASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 HCG24-202ENST00000414398 717 ntTSL 3 BASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 AC000078.1-201ENST00000420617 682 ntBASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 AL133351.2-201ENST00000437718 484 ntTSL 2 BASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 AC139143.1-201ENST00000441772 1207 ntBASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 METTL7AP1-201ENST00000547343 496 ntBASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 AC005332.2-201ENST00000590010 930 ntBASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 MIR6165-201ENST00000614803 84 ntBASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 AC012594.1-273ENST00000626618 816 ntTSL 5 BASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC16.24■□□□□ 0.19
TMEM88BA6NKF7 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms