Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 AC093826.1-201ENST00000508655 993 ntBASIC20.78■□□□□ 0.92
HFM1A2PYH4 RN7SL556P-201ENST00000582856 298 ntBASIC20.78■□□□□ 0.92
HFM1A2PYH4 NAMA-206ENST00000605377 509 ntTSL 5 BASIC20.78■□□□□ 0.92
HFM1A2PYH4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HFM1A2PYH4 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HFM1A2PYH4 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HFM1A2PYH4 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
HFM1A2PYH4 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HFM1A2PYH4 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
HFM1A2PYH4 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC20.78■□□□□ 0.92
HFM1A2PYH4 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC20.78■□□□□ 0.92
HFM1A2PYH4 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HFM1A2PYH4 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HFM1A2PYH4 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HFM1A2PYH4 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HFM1A2PYH4 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HFM1A2PYH4 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HFM1A2PYH4 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
HFM1A2PYH4 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HFM1A2PYH4 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HFM1A2PYH4 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
HFM1A2PYH4 Z69890.1-201ENST00000382990 339 ntBASIC20.78■□□□□ 0.92
HFM1A2PYH4 OR2W2P-201ENST00000406313 909 ntBASIC20.78■□□□□ 0.92
HFM1A2PYH4 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC20.78■□□□□ 0.92
HFM1A2PYH4 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC20.78■□□□□ 0.92
HFM1A2PYH4 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC20.78■□□□□ 0.92
HFM1A2PYH4 RPL13AP19-201ENST00000434320 584 ntBASIC20.78■□□□□ 0.92
HFM1A2PYH4 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC20.78■□□□□ 0.92
HFM1A2PYH4 RN7SL818P-201ENST00000485099 259 ntBASIC20.78■□□□□ 0.92
HFM1A2PYH4 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC20.78■□□□□ 0.92
HFM1A2PYH4 RNA5SP406-201ENST00000516106 112 ntBASIC20.78■□□□□ 0.92
HFM1A2PYH4 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC20.78■□□□□ 0.92
HFM1A2PYH4 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC20.78■□□□□ 0.92
HFM1A2PYH4 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC20.78■□□□□ 0.92
HFM1A2PYH4 RN7SL725P-201ENST00000606439 259 ntBASIC20.78■□□□□ 0.92
HFM1A2PYH4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
HFM1A2PYH4 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HFM1A2PYH4 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HFM1A2PYH4 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC20.77■□□□□ 0.92
HFM1A2PYH4 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
HFM1A2PYH4 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HFM1A2PYH4 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
HFM1A2PYH4 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
HFM1A2PYH4 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HFM1A2PYH4 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC20.77■□□□□ 0.92
HFM1A2PYH4 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC20.77■□□□□ 0.92
HFM1A2PYH4 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC20.77■□□□□ 0.92
HFM1A2PYH4 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
HFM1A2PYH4 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
HFM1A2PYH4 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HFM1A2PYH4 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
HFM1A2PYH4 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
HFM1A2PYH4 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC20.77■□□□□ 0.91
HFM1A2PYH4 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
HFM1A2PYH4 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC20.77■□□□□ 0.91
HFM1A2PYH4 AC093300.1-201ENST00000510368 1201 ntBASIC20.77■□□□□ 0.91
HFM1A2PYH4 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
HFM1A2PYH4 MIR6756-201ENST00000616240 63 ntBASIC20.77■□□□□ 0.91
HFM1A2PYH4 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC20.77■□□□□ 0.91
HFM1A2PYH4 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
HFM1A2PYH4 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC20.77■□□□□ 0.91
HFM1A2PYH4 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC20.77■□□□□ 0.91
HFM1A2PYH4 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
HFM1A2PYH4 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
HFM1A2PYH4 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
HFM1A2PYH4 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HFM1A2PYH4 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HFM1A2PYH4 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
HFM1A2PYH4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
HFM1A2PYH4 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
HFM1A2PYH4 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC20.76■□□□□ 0.91
HFM1A2PYH4 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HFM1A2PYH4 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HFM1A2PYH4 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC20.76■□□□□ 0.91
HFM1A2PYH4 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC20.76■□□□□ 0.91
HFM1A2PYH4 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HFM1A2PYH4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HFM1A2PYH4 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC20.76■□□□□ 0.91
HFM1A2PYH4 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC20.76■□□□□ 0.91
HFM1A2PYH4 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HFM1A2PYH4 AC138932.1-201ENST00000534164 6830 ntBASIC20.76■□□□□ 0.91
HFM1A2PYH4 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HFM1A2PYH4 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HFM1A2PYH4 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HFM1A2PYH4 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
HFM1A2PYH4 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HFM1A2PYH4 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC20.76■□□□□ 0.91
HFM1A2PYH4 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC20.76■□□□□ 0.91
HFM1A2PYH4 EEF1GP8-201ENST00000506566 1154 ntBASIC20.76■□□□□ 0.91
HFM1A2PYH4 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC20.76■□□□□ 0.91
HFM1A2PYH4 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC20.76■□□□□ 0.91
HFM1A2PYH4 BATF-202ENST00000555504 361 ntTSL 2 BASIC20.76■□□□□ 0.91
HFM1A2PYH4 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC20.76■□□□□ 0.91
HFM1A2PYH4 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
HFM1A2PYH4 GMFG-209ENST00000600322 622 ntTSL 5 BASIC20.76■□□□□ 0.91
HFM1A2PYH4 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HFM1A2PYH4 PKD1P1-201ENST00000458669 6805 ntBASIC20.76■□□□□ 0.91
HFM1A2PYH4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HFM1A2PYH4 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HFM1A2PYH4 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms