Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 MIR769-201ENST00000390225 118 ntBASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 AC090857.1-201ENST00000527400 390 ntBASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
PCDHGC4Q9Y5F7 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 AC239868.1-201ENST00000369385 493 ntBASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 RN7SL277P-201ENST00000481521 288 ntBASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 MIR3188-201ENST00000583494 85 ntBASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 AL139099.5-201ENST00000635274 300 ntBASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGC4Q9Y5F7 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGC4Q9Y5F7 AC008132.1-202ENST00000342005 1389 ntBASIC14.48□□□□□ -0.09
PCDHGC4Q9Y5F7 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGC4Q9Y5F7 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGC4Q9Y5F7 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
PCDHGC4Q9Y5F7 AC015909.3-201ENST00000572855 1794 ntBASIC14.48□□□□□ -0.09
PCDHGC4Q9Y5F7 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.48□□□□□ -0.09
PCDHGC4Q9Y5F7 TCAM1P-207ENST00000485295 1537 ntBASIC14.48□□□□□ -0.09
PCDHGC4Q9Y5F7 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGC4Q9Y5F7 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
PCDHGC4Q9Y5F7 RNA5SP359-201ENST00000364838 113 ntBASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms