Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHANK2Q9UPX8 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHANK2Q9UPX8 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHANK2Q9UPX8 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHANK2Q9UPX8 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC20.69■□□□□ 0.9
SHANK2Q9UPX8 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC20.69■□□□□ 0.9
SHANK2Q9UPX8 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SHANK2Q9UPX8 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SHANK2Q9UPX8 SNU13-204ENST00000402458 462 ntTSL 3 BASIC20.69■□□□□ 0.9
SHANK2Q9UPX8 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC20.69■□□□□ 0.9
SHANK2Q9UPX8 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC20.69■□□□□ 0.9
SHANK2Q9UPX8 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC20.69■□□□□ 0.9
SHANK2Q9UPX8 AC005077.3-201ENST00000449614 213 ntBASIC20.69■□□□□ 0.9
SHANK2Q9UPX8 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC20.69■□□□□ 0.9
SHANK2Q9UPX8 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC20.69■□□□□ 0.9
SHANK2Q9UPX8 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC20.69■□□□□ 0.9
SHANK2Q9UPX8 AL353622.2-201ENST00000605846 425 ntBASIC20.69■□□□□ 0.9
SHANK2Q9UPX8 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SHANK2Q9UPX8 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SHANK2Q9UPX8 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC20.69■□□□□ 0.9
SHANK2Q9UPX8 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHANK2Q9UPX8 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC20.69■□□□□ 0.9
SHANK2Q9UPX8 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SHANK2Q9UPX8 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
SHANK2Q9UPX8 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHANK2Q9UPX8 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SHANK2Q9UPX8 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHANK2Q9UPX8 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC20.69■□□□□ 0.9
SHANK2Q9UPX8 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHANK2Q9UPX8 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHANK2Q9UPX8 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SHANK2Q9UPX8 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC20.69■□□□□ 0.9
SHANK2Q9UPX8 AC092570.1-201ENST00000414446 469 ntBASIC20.69■□□□□ 0.9
SHANK2Q9UPX8 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SHANK2Q9UPX8 PGK1P2-201ENST00000431702 1214 ntBASIC20.69■□□□□ 0.9
SHANK2Q9UPX8 GOLGA6L16P-201ENST00000441780 1299 ntBASIC20.69■□□□□ 0.9
SHANK2Q9UPX8 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC20.69■□□□□ 0.9
SHANK2Q9UPX8 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC20.69■□□□□ 0.9
SHANK2Q9UPX8 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHANK2Q9UPX8 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHANK2Q9UPX8 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC20.68■□□□□ 0.9
SHANK2Q9UPX8 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHANK2Q9UPX8 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SHANK2Q9UPX8 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC20.68■□□□□ 0.9
SHANK2Q9UPX8 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHANK2Q9UPX8 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC20.68■□□□□ 0.9
SHANK2Q9UPX8 AC152010.1-201ENST00000415779 2006 ntBASIC20.68■□□□□ 0.9
SHANK2Q9UPX8 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHANK2Q9UPX8 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SHANK2Q9UPX8 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SHANK2Q9UPX8 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC20.68■□□□□ 0.9
SHANK2Q9UPX8 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SHANK2Q9UPX8 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC20.68■□□□□ 0.9
SHANK2Q9UPX8 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC20.68■□□□□ 0.9
SHANK2Q9UPX8 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHANK2Q9UPX8 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHANK2Q9UPX8 PGAM1P11-201ENST00000416729 680 ntBASIC20.68■□□□□ 0.9
SHANK2Q9UPX8 AL080243.1-201ENST00000423293 1060 ntBASIC20.68■□□□□ 0.9
SHANK2Q9UPX8 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC20.68■□□□□ 0.9
SHANK2Q9UPX8 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC20.68■□□□□ 0.9
SHANK2Q9UPX8 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC20.68■□□□□ 0.9
SHANK2Q9UPX8 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC20.68■□□□□ 0.9
SHANK2Q9UPX8 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC20.68■□□□□ 0.9
SHANK2Q9UPX8 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC20.68■□□□□ 0.9
SHANK2Q9UPX8 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC20.68■□□□□ 0.9
SHANK2Q9UPX8 CASP3-205ENST00000517513 964 ntTSL 5 BASIC20.68■□□□□ 0.9
SHANK2Q9UPX8 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC20.68■□□□□ 0.9
SHANK2Q9UPX8 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC20.68■□□□□ 0.9
SHANK2Q9UPX8 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC20.68■□□□□ 0.9
SHANK2Q9UPX8 AL590235.1-201ENST00000564650 861 ntBASIC20.68■□□□□ 0.9
SHANK2Q9UPX8 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SHANK2Q9UPX8 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SHANK2Q9UPX8 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC20.68■□□□□ 0.9
SHANK2Q9UPX8 RCC2P5-201ENST00000492126 1487 ntBASIC20.68■□□□□ 0.9
SHANK2Q9UPX8 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHANK2Q9UPX8 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHANK2Q9UPX8 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
SHANK2Q9UPX8 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHANK2Q9UPX8 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC20.67■□□□□ 0.9
SHANK2Q9UPX8 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC20.67■□□□□ 0.9
SHANK2Q9UPX8 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC20.67■□□□□ 0.9
SHANK2Q9UPX8 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHANK2Q9UPX8 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC20.67■□□□□ 0.9
SHANK2Q9UPX8 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHANK2Q9UPX8 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC20.67■□□□□ 0.9
SHANK2Q9UPX8 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHANK2Q9UPX8 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC20.67■□□□□ 0.9
SHANK2Q9UPX8 RNLS-203ENST00000437752 525 ntTSL 2 BASIC20.67■□□□□ 0.9
SHANK2Q9UPX8 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SHANK2Q9UPX8 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC20.67■□□□□ 0.9
SHANK2Q9UPX8 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC20.67■□□□□ 0.9
SHANK2Q9UPX8 DUT-207ENST00000559416 635 ntTSL 2 BASIC20.67■□□□□ 0.9
SHANK2Q9UPX8 RN7SL134P-201ENST00000579756 303 ntBASIC20.67■□□□□ 0.9
SHANK2Q9UPX8 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHANK2Q9UPX8 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SHANK2Q9UPX8 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHANK2Q9UPX8 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHANK2Q9UPX8 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHANK2Q9UPX8 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHANK2Q9UPX8 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms