Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 DUTP3-201ENST00000450025 415 ntBASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 AC114947.1-202ENST00000514136 344 ntBASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 AC103691.2-201ENST00000618824 433 ntBASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 LINC01815-202ENST00000641468 1409 ntBASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 RDX-218ENST00000544551 4117 ntTSL 2 BASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 FTLP1-201ENST00000449155 526 ntBASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 FGFR3P1-201ENST00000449999 601 ntBASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 COG4-212ENST00000564653 590 ntTSL 5 BASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 AC009560.1-201ENST00000620208 434 ntBASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 AC051619.9-201ENST00000623237 597 ntBASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMG20BQ9P0W2 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMG20BQ9P0W2 AL022313.4-201ENST00000562756 2046 ntBASIC17.4■□□□□ 0.38
HMG20BQ9P0W2 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HMG20BQ9P0W2 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC17.4■□□□□ 0.38
HMG20BQ9P0W2 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC17.4■□□□□ 0.38
HMG20BQ9P0W2 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC17.4■□□□□ 0.38
HMG20BQ9P0W2 AC011474.4-201ENST00000623523 2076 ntBASIC17.4■□□□□ 0.38
HMG20BQ9P0W2 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMG20BQ9P0W2 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMG20BQ9P0W2 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HMG20BQ9P0W2 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMG20BQ9P0W2 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HMG20BQ9P0W2 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HMG20BQ9P0W2 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC17.4■□□□□ 0.38
HMG20BQ9P0W2 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
HMG20BQ9P0W2 MIR33B-201ENST00000385104 96 ntBASIC17.4■□□□□ 0.38
HMG20BQ9P0W2 AC026316.1-201ENST00000398900 414 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms