Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CBX8Q9HC52 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CBX8Q9HC52 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CBX8Q9HC52 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CBX8Q9HC52 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CBX8Q9HC52 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC16.08■□□□□ 0.16
CBX8Q9HC52 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CBX8Q9HC52 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CBX8Q9HC52 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC16.07■□□□□ 0.16
CBX8Q9HC52 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.07■□□□□ 0.16
CBX8Q9HC52 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CBX8Q9HC52 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
CBX8Q9HC52 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC16.07■□□□□ 0.16
CBX8Q9HC52 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
CBX8Q9HC52 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CBX8Q9HC52 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CBX8Q9HC52 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC16.07■□□□□ 0.16
CBX8Q9HC52 DKFZP434A062-201ENST00000573103 5021 ntBASIC16.07■□□□□ 0.16
CBX8Q9HC52 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CBX8Q9HC52 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CBX8Q9HC52 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CBX8Q9HC52 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CBX8Q9HC52 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CBX8Q9HC52 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CBX8Q9HC52 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CBX8Q9HC52 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CBX8Q9HC52 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CBX8Q9HC52 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.07■□□□□ 0.16
CBX8Q9HC52 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC16.07■□□□□ 0.16
CBX8Q9HC52 AC092183.1-201ENST00000469884 875 ntBASIC16.07■□□□□ 0.16
CBX8Q9HC52 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.07■□□□□ 0.16
CBX8Q9HC52 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CBX8Q9HC52 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CBX8Q9HC52 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC16.07■□□□□ 0.16
CBX8Q9HC52 AC106820.3-201ENST00000561653 397 ntBASIC16.07■□□□□ 0.16
CBX8Q9HC52 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC16.07■□□□□ 0.16
CBX8Q9HC52 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CBX8Q9HC52 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CBX8Q9HC52 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CBX8Q9HC52 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.07■□□□□ 0.16
CBX8Q9HC52 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CBX8Q9HC52 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CBX8Q9HC52 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CBX8Q9HC52 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CBX8Q9HC52 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CBX8Q9HC52 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC16.07■□□□□ 0.16
CBX8Q9HC52 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CBX8Q9HC52 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC16.07■□□□□ 0.16
CBX8Q9HC52 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CBX8Q9HC52 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CBX8Q9HC52 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CBX8Q9HC52 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CBX8Q9HC52 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CBX8Q9HC52 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC16.07■□□□□ 0.16
CBX8Q9HC52 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CBX8Q9HC52 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC16.06■□□□□ 0.16
CBX8Q9HC52 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CBX8Q9HC52 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CBX8Q9HC52 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CBX8Q9HC52 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CBX8Q9HC52 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBX8Q9HC52 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC16.06■□□□□ 0.16
CBX8Q9HC52 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBX8Q9HC52 AC060814.4-201ENST00000594169 2163 ntBASIC16.06■□□□□ 0.16
CBX8Q9HC52 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBX8Q9HC52 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
CBX8Q9HC52 AC108024.1-201ENST00000626286 1721 ntBASIC16.06■□□□□ 0.16
CBX8Q9HC52 AL138709.1-201ENST00000614840 1693 ntBASIC16.06■□□□□ 0.16
CBX8Q9HC52 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBX8Q9HC52 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CBX8Q9HC52 TUBB4AP1-201ENST00000450755 1325 ntBASIC16.06■□□□□ 0.16
CBX8Q9HC52 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.06■□□□□ 0.16
CBX8Q9HC52 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CBX8Q9HC52 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.06■□□□□ 0.16
CBX8Q9HC52 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CBX8Q9HC52 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.06■□□□□ 0.16
CBX8Q9HC52 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.06■□□□□ 0.16
CBX8Q9HC52 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.06■□□□□ 0.16
CBX8Q9HC52 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.06■□□□□ 0.16
CBX8Q9HC52 CICP12-201ENST00000455801 843 ntBASIC16.06■□□□□ 0.16
CBX8Q9HC52 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CBX8Q9HC52 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CBX8Q9HC52 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.06■□□□□ 0.16
CBX8Q9HC52 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CBX8Q9HC52 JPT2-214ENST00000569765 782 ntTSL 2 BASIC16.06■□□□□ 0.16
CBX8Q9HC52 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.06■□□□□ 0.16
CBX8Q9HC52 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
CBX8Q9HC52 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBX8Q9HC52 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CBX8Q9HC52 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CBX8Q9HC52 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
CBX8Q9HC52 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBX8Q9HC52 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBX8Q9HC52 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBX8Q9HC52 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBX8Q9HC52 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBX8Q9HC52 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC16.06■□□□□ 0.16
CBX8Q9HC52 RHPN1-AS1-201ENST00000518049 1918 ntBASIC16.06■□□□□ 0.16
CBX8Q9HC52 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.05■□□□□ 0.16
CBX8Q9HC52 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms