Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC16.16■□□□□ 0.18
TNFRSF25Q93038 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC16.16■□□□□ 0.18
TNFRSF25Q93038 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNFRSF25Q93038 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNFRSF25Q93038 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TNFRSF25Q93038 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNFRSF25Q93038 KRT17P5-201ENST00000332088 839 ntBASIC16.16■□□□□ 0.18
TNFRSF25Q93038 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.16■□□□□ 0.18
TNFRSF25Q93038 BANF1P3-201ENST00000412556 261 ntBASIC16.16■□□□□ 0.18
TNFRSF25Q93038 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC16.16■□□□□ 0.18
TNFRSF25Q93038 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC16.16■□□□□ 0.18
TNFRSF25Q93038 KRTAP19-9P-201ENST00000421795 191 ntBASIC16.16■□□□□ 0.18
TNFRSF25Q93038 CALR4P-201ENST00000431943 946 ntBASIC16.16■□□□□ 0.18
TNFRSF25Q93038 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC16.16■□□□□ 0.18
TNFRSF25Q93038 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC16.16■□□□□ 0.18
TNFRSF25Q93038 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC16.16■□□□□ 0.18
TNFRSF25Q93038 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC16.16■□□□□ 0.18
TNFRSF25Q93038 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16.16■□□□□ 0.18
TNFRSF25Q93038 AC024681.1-201ENST00000521917 487 ntBASIC16.16■□□□□ 0.18
TNFRSF25Q93038 AC090857.1-201ENST00000527400 390 ntBASIC16.16■□□□□ 0.18
TNFRSF25Q93038 CMC2-204ENST00000562713 573 ntTSL 3 BASIC16.16■□□□□ 0.18
TNFRSF25Q93038 CMC2-209ENST00000565108 399 ntTSL 2 BASIC16.16■□□□□ 0.18
TNFRSF25Q93038 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TNFRSF25Q93038 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.16■□□□□ 0.18
TNFRSF25Q93038 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC16.16■□□□□ 0.18
TNFRSF25Q93038 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TNFRSF25Q93038 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNFRSF25Q93038 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
TNFRSF25Q93038 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TNFRSF25Q93038 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TNFRSF25Q93038 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNFRSF25Q93038 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNFRSF25Q93038 AC067930.6-201ENST00000623257 4947 ntBASIC16.16■□□□□ 0.18
TNFRSF25Q93038 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TNFRSF25Q93038 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNFRSF25Q93038 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TNFRSF25Q93038 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.16■□□□□ 0.18
TNFRSF25Q93038 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNFRSF25Q93038 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC16.16■□□□□ 0.18
TNFRSF25Q93038 PCDHA3-202ENST00000532566 4594 ntBASIC16.16■□□□□ 0.18
TNFRSF25Q93038 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
TNFRSF25Q93038 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNFRSF25Q93038 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
TNFRSF25Q93038 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TNFRSF25Q93038 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC16.15■□□□□ 0.18
TNFRSF25Q93038 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TNFRSF25Q93038 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TNFRSF25Q93038 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNFRSF25Q93038 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNFRSF25Q93038 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
TNFRSF25Q93038 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNFRSF25Q93038 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNFRSF25Q93038 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC16.15■□□□□ 0.18
TNFRSF25Q93038 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TNFRSF25Q93038 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNFRSF25Q93038 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC16.15■□□□□ 0.18
TNFRSF25Q93038 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
TNFRSF25Q93038 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
TNFRSF25Q93038 BX679664.3-201ENST00000414070 555 ntBASIC16.15■□□□□ 0.18
TNFRSF25Q93038 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC16.15■□□□□ 0.18
TNFRSF25Q93038 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC16.15■□□□□ 0.18
TNFRSF25Q93038 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC16.15■□□□□ 0.18
TNFRSF25Q93038 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TNFRSF25Q93038 AC113935.1-201ENST00000471722 555 ntBASIC16.15■□□□□ 0.18
TNFRSF25Q93038 TSACC-208ENST00000481479 741 ntTSL 2 BASIC16.15■□□□□ 0.18
TNFRSF25Q93038 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNFRSF25Q93038 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TNFRSF25Q93038 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
TNFRSF25Q93038 AL161670.2-201ENST00000557650 1227 ntBASIC16.15■□□□□ 0.18
TNFRSF25Q93038 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC16.15■□□□□ 0.18
TNFRSF25Q93038 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC16.15■□□□□ 0.18
TNFRSF25Q93038 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNFRSF25Q93038 AC091544.8-201ENST00000619490 361 ntBASIC16.15■□□□□ 0.18
TNFRSF25Q93038 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.15■□□□□ 0.18
TNFRSF25Q93038 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TNFRSF25Q93038 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC16.15■□□□□ 0.18
TNFRSF25Q93038 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC16.15■□□□□ 0.18
TNFRSF25Q93038 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC16.15■□□□□ 0.18
TNFRSF25Q93038 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNFRSF25Q93038 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TNFRSF25Q93038 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNFRSF25Q93038 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
TNFRSF25Q93038 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TNFRSF25Q93038 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TNFRSF25Q93038 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TNFRSF25Q93038 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC16.14■□□□□ 0.17
TNFRSF25Q93038 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC16.14■□□□□ 0.17
TNFRSF25Q93038 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
TNFRSF25Q93038 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TNFRSF25Q93038 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TNFRSF25Q93038 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TNFRSF25Q93038 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC16.14■□□□□ 0.17
TNFRSF25Q93038 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC16.14■□□□□ 0.17
TNFRSF25Q93038 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TNFRSF25Q93038 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TNFRSF25Q93038 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TNFRSF25Q93038 KRT8P31-201ENST00000504812 1408 ntBASIC16.14■□□□□ 0.17
TNFRSF25Q93038 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TNFRSF25Q93038 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TNFRSF25Q93038 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms