Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 EXOC7-207ENST00000411744 2031 ntAPPRIS ALT1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SVIPQ8NHG7 TMEM161B-213ENST00000514135 2035 ntTSL 2 BASIC8.55□□□□□ -1.04
SVIPQ8NHG7 HCG18-244ENST00000602516 2890 ntBASIC8.55□□□□□ -1.04
SVIPQ8NHG7 RNF17-202ENST00000255325 2134 ntTSL 2 BASIC8.55□□□□□ -1.04
SVIPQ8NHG7 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC8.55□□□□□ -1.04
SVIPQ8NHG7 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC8.55□□□□□ -1.04
SVIPQ8NHG7 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC8.55□□□□□ -1.04
SVIPQ8NHG7 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC8.55□□□□□ -1.04
SVIPQ8NHG7 AC009955.4-201ENST00000597192 544 ntBASIC8.55□□□□□ -1.04
SVIPQ8NHG7 STRADA-230ENST00000638702 2140 ntTSL 5 BASIC8.55□□□□□ -1.04
SVIPQ8NHG7 SAMHD1-201ENST00000262878 4784 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SVIPQ8NHG7 PKM-202ENST00000335181 2318 ntAPPRIS ALT1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SVIPQ8NHG7 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC8.55□□□□□ -1.04
SVIPQ8NHG7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
SVIPQ8NHG7 AGAP1-207ENST00000428334 10090 ntTSL 5 BASIC8.55□□□□□ -1.04
SVIPQ8NHG7 ITGA7-203ENST00000452168 3763 ntAPPRIS ALT2 TSL 2 BASIC8.55□□□□□ -1.04
SVIPQ8NHG7 PITPNB-201ENST00000320996 2826 ntAPPRIS ALT1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SVIPQ8NHG7 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SVIPQ8NHG7 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
SVIPQ8NHG7 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SVIPQ8NHG7 AGPAT4-IT1-201ENST00000624499 1878 ntBASIC8.55□□□□□ -1.04
SVIPQ8NHG7 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SVIPQ8NHG7 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC8.55□□□□□ -1.04
SVIPQ8NHG7 HLTF-208ENST00000494055 3633 ntAPPRIS P3 TSL 2 BASIC8.55□□□□□ -1.04
SVIPQ8NHG7 TRAF1-203ENST00000546084 3715 ntTSL 2 BASIC8.55□□□□□ -1.04
SVIPQ8NHG7 GDNF-201ENST00000326524 3810 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SVIPQ8NHG7 LINC01460-201ENST00000379677 2860 ntTSL 2 BASIC8.55□□□□□ -1.04
SVIPQ8NHG7 PSME3-205ENST00000545225 3082 ntTSL 2 BASIC8.55□□□□□ -1.04
SVIPQ8NHG7 LINC00909-202ENST00000580048 3463 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SVIPQ8NHG7 ATP1A3-201ENST00000302102 3597 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SVIPQ8NHG7 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 SEC16B-201ENST00000308284 3985 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 TACC2-204ENST00000360561 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 AC093829.1-201ENST00000506662 1618 ntBASIC8.54□□□□□ -1.04
SVIPQ8NHG7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 ZNF587B-203ENST00000594901 2118 ntAPPRIS P1 TSL 4 BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 MYT1-205ENST00000622439 2140 ntTSL 5 BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 KY-201ENST00000423778 2345 ntAPPRIS P2 TSL 5 BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 AC011379.1-201ENST00000508713 3025 ntBASIC8.54□□□□□ -1.04
SVIPQ8NHG7 SCMH1-206ENST00000372596 3323 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 OXNAD1-201ENST00000285083 3929 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 TJAP1-215ENST00000612912 4312 ntTSL 2 BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 PEG3-202ENST00000593695 4741 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 SPATA13-202ENST00000382095 6665 ntAPPRIS P3 TSL 2 BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 COL12A1-201ENST00000322507 11723 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 RGS3-203ENST00000343817 3689 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 ISX-201ENST00000308700 3384 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 MEF2C-239ENST00000636294 2576 ntTSL 5 BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 EXOC7P1-201ENST00000509881 2059 ntBASIC8.54□□□□□ -1.04
SVIPQ8NHG7 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 LRRC55-201ENST00000497933 5410 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 SERPIND1-202ENST00000406799 1798 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 LINC01934-205ENST00000435411 1771 ntTSL 5 BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 MTCO3P17-201ENST00000443775 513 ntBASIC8.54□□□□□ -1.04
SVIPQ8NHG7 C14orf159-208ENST00000517877 591 ntTSL 3 BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 COA4-204ENST00000541455 1038 ntTSL 5 BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 AC092130.1-201ENST00000565531 531 ntTSL 4 BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 AC010632.2-201ENST00000588369 1224 ntBASIC8.54□□□□□ -1.04
SVIPQ8NHG7 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC8.54□□□□□ -1.04
SVIPQ8NHG7 TRAPPC6B-202ENST00000347691 3229 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 ZBTB21-203ENST00000398499 5806 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 R3HDM2-202ENST00000358907 3974 ntAPPRIS P2 TSL 5 BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 GS1-600G8.3-201ENST00000431486 2249 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 AP002358.2-201ENST00000532980 2148 ntBASIC8.54□□□□□ -1.04
SVIPQ8NHG7 FAM149A-206ENST00000503432 2011 ntAPPRIS P2 TSL 2 BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 AC068491.4-201ENST00000622940 3380 ntBASIC8.54□□□□□ -1.04
SVIPQ8NHG7 POTEH-201ENST00000343518 1928 ntAPPRIS P2 TSL 5 BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 STX16-203ENST00000358029 4329 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 ZFP1-203ENST00000464850 3067 ntTSL 2 BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 MAGEA11-201ENST00000333104 1845 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 AC010729.1-201ENST00000413960 1746 ntTSL 3 BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 CDC14C-201ENST00000428251 1719 ntBASIC8.54□□□□□ -1.04
SVIPQ8NHG7 USP54-204ENST00000422491 2777 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 AC099654.3-201ENST00000447087 1546 ntBASIC8.54□□□□□ -1.04
SVIPQ8NHG7 ITGAX-204ENST00000562918 1521 ntTSL 2 BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 MIR219A2-201ENST00000608502 1504 ntBASIC8.54□□□□□ -1.04
SVIPQ8NHG7 TCF4-204ENST00000457482 2372 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SVIPQ8NHG7 C17orf51-201ENST00000391411 7914 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
SVIPQ8NHG7 IL10RA-201ENST00000227752 3695 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SVIPQ8NHG7 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SVIPQ8NHG7 ZSCAN31-203ENST00000414429 3551 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
SVIPQ8NHG7 LIMCH1-203ENST00000396595 5740 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SVIPQ8NHG7 CLEC4M-201ENST00000248228 1865 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
SVIPQ8NHG7 CATSPER1-201ENST00000312106 2619 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SVIPQ8NHG7 CDH5-201ENST00000341529 4120 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SVIPQ8NHG7 PGM2-201ENST00000381967 3264 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SVIPQ8NHG7 HMGCLL1-205ENST00000398661 2532 ntTSL 2 BASIC8.53□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms