Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC15.43■□□□□ 0.06
BEST2Q8NFU1 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC15.43■□□□□ 0.06
BEST2Q8NFU1 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC15.43■□□□□ 0.06
BEST2Q8NFU1 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
BEST2Q8NFU1 AC020910.6-201ENST00000623084 1459 ntBASIC15.43■□□□□ 0.06
BEST2Q8NFU1 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
BEST2Q8NFU1 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
BEST2Q8NFU1 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
BEST2Q8NFU1 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
BEST2Q8NFU1 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
BEST2Q8NFU1 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
BEST2Q8NFU1 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
BEST2Q8NFU1 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.43■□□□□ 0.06
BEST2Q8NFU1 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC15.43■□□□□ 0.06
BEST2Q8NFU1 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
BEST2Q8NFU1 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
BEST2Q8NFU1 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
BEST2Q8NFU1 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
BEST2Q8NFU1 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
BEST2Q8NFU1 TUBB8P4-201ENST00000511806 1324 ntBASIC15.43■□□□□ 0.06
BEST2Q8NFU1 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
BEST2Q8NFU1 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
BEST2Q8NFU1 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
BEST2Q8NFU1 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
BEST2Q8NFU1 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.42■□□□□ 0.06
BEST2Q8NFU1 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
BEST2Q8NFU1 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
BEST2Q8NFU1 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
BEST2Q8NFU1 HINT2P1-201ENST00000419438 481 ntBASIC15.42■□□□□ 0.06
BEST2Q8NFU1 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
BEST2Q8NFU1 RPL8P2-201ENST00000430538 502 ntBASIC15.42■□□□□ 0.06
BEST2Q8NFU1 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC15.42■□□□□ 0.06
BEST2Q8NFU1 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC15.42■□□□□ 0.06
BEST2Q8NFU1 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
BEST2Q8NFU1 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
BEST2Q8NFU1 AC114947.1-202ENST00000514136 344 ntBASIC15.42■□□□□ 0.06
BEST2Q8NFU1 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
BEST2Q8NFU1 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC15.42■□□□□ 0.06
BEST2Q8NFU1 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC15.42■□□□□ 0.06
BEST2Q8NFU1 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.42■□□□□ 0.06
BEST2Q8NFU1 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC15.42■□□□□ 0.06
BEST2Q8NFU1 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
BEST2Q8NFU1 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC15.42■□□□□ 0.06
BEST2Q8NFU1 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC15.42■□□□□ 0.06
BEST2Q8NFU1 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.42■□□□□ 0.06
BEST2Q8NFU1 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
BEST2Q8NFU1 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
BEST2Q8NFU1 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
BEST2Q8NFU1 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.42■□□□□ 0.06
BEST2Q8NFU1 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.42■□□□□ 0.06
BEST2Q8NFU1 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
BEST2Q8NFU1 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
BEST2Q8NFU1 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
BEST2Q8NFU1 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
BEST2Q8NFU1 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
BEST2Q8NFU1 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
BEST2Q8NFU1 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
BEST2Q8NFU1 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
BEST2Q8NFU1 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
BEST2Q8NFU1 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
BEST2Q8NFU1 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
BEST2Q8NFU1 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
BEST2Q8NFU1 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC15.41■□□□□ 0.06
BEST2Q8NFU1 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
BEST2Q8NFU1 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.41■□□□□ 0.06
BEST2Q8NFU1 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.41■□□□□ 0.06
BEST2Q8NFU1 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
BEST2Q8NFU1 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
BEST2Q8NFU1 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
BEST2Q8NFU1 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
BEST2Q8NFU1 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
BEST2Q8NFU1 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
BEST2Q8NFU1 AC007952.5-201ENST00000572818 1486 ntBASIC15.41■□□□□ 0.06
BEST2Q8NFU1 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
BEST2Q8NFU1 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
BEST2Q8NFU1 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
BEST2Q8NFU1 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.41■□□□□ 0.06
BEST2Q8NFU1 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
BEST2Q8NFU1 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
BEST2Q8NFU1 CAP2P1-201ENST00000557743 1390 ntBASIC15.41■□□□□ 0.06
BEST2Q8NFU1 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.41■□□□□ 0.06
BEST2Q8NFU1 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
BEST2Q8NFU1 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
BEST2Q8NFU1 UFM1-202ENST00000379649 846 ntTSL 4 BASIC15.41■□□□□ 0.06
BEST2Q8NFU1 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
BEST2Q8NFU1 AL583805.1-201ENST00000391389 531 ntBASIC15.41■□□□□ 0.06
BEST2Q8NFU1 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
BEST2Q8NFU1 GGCT-203ENST00000409144 836 ntTSL 2 BASIC15.41■□□□□ 0.06
BEST2Q8NFU1 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC15.41■□□□□ 0.06
BEST2Q8NFU1 DUTP3-201ENST00000450025 415 ntBASIC15.41■□□□□ 0.06
BEST2Q8NFU1 AP000358.1-201ENST00000456260 156 ntBASIC15.41■□□□□ 0.06
BEST2Q8NFU1 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC15.41■□□□□ 0.06
BEST2Q8NFU1 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
BEST2Q8NFU1 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC15.41■□□□□ 0.06
BEST2Q8NFU1 MIR3677-201ENST00000578964 60 ntBASIC15.41■□□□□ 0.06
BEST2Q8NFU1 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC15.41■□□□□ 0.06
BEST2Q8NFU1 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC15.41■□□□□ 0.06
BEST2Q8NFU1 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
BEST2Q8NFU1 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC15.41■□□□□ 0.06
BEST2Q8NFU1 KRT8P31-201ENST00000504812 1408 ntBASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms