Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 AC011247.3-201ENST00000603297 438 ntBASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 ST5-261ENST00000626808 1071 ntTSL 5 BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 AC002472.4-201ENST00000641915 272 ntBASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS3Q8IXF0 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 CTBP2P8-201ENST00000422584 1330 ntBASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 AC064801.2-201ENST00000625052 1303 ntBASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 NHP2-202ENST00000314397 599 ntTSL 2 BASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 BX679664.3-201ENST00000414070 555 ntBASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 AQP7P5-201ENST00000428759 1049 ntBASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 AC012497.1-201ENST00000429392 575 ntBASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 AQP7P4-201ENST00000447083 1042 ntBASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 AQP7P2-201ENST00000453967 1041 ntBASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 AC113935.1-201ENST00000471722 555 ntBASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 RN7SL767P-201ENST00000493013 295 ntBASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 PGAM1P12-201ENST00000505622 748 ntBASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 AC005740.1-201ENST00000515639 522 ntBASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 AC244250.3-201ENST00000620749 366 ntBASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 AQP7P3-201ENST00000624547 1041 ntBASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS3Q8IXF0 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.77□□□□□ -0.04
NPAS3Q8IXF0 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
NPAS3Q8IXF0 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NPAS3Q8IXF0 AC106881.1-201ENST00000605849 3329 ntBASIC14.77□□□□□ -0.04
NPAS3Q8IXF0 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
NPAS3Q8IXF0 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NPAS3Q8IXF0 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
NPAS3Q8IXF0 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
NPAS3Q8IXF0 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.77□□□□□ -0.04
NPAS3Q8IXF0 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
NPAS3Q8IXF0 MIR600HG-201ENST00000449175 5984 ntBASIC14.77□□□□□ -0.04
NPAS3Q8IXF0 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
NPAS3Q8IXF0 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
NPAS3Q8IXF0 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NPAS3Q8IXF0 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC14.77□□□□□ -0.04
NPAS3Q8IXF0 MYO15B-237ENST00000642007 4893 ntBASIC14.77□□□□□ -0.04
NPAS3Q8IXF0 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
NPAS3Q8IXF0 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
NPAS3Q8IXF0 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
NPAS3Q8IXF0 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
NPAS3Q8IXF0 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NPAS3Q8IXF0 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.77□□□□□ -0.04
NPAS3Q8IXF0 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms