Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
RNF44Q7L0R7 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.81□□□□□ -0.2
RNF44Q7L0R7 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.81□□□□□ -0.2
RNF44Q7L0R7 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
RNF44Q7L0R7 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF44Q7L0R7 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RNF44Q7L0R7 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF44Q7L0R7 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
RNF44Q7L0R7 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF44Q7L0R7 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.81□□□□□ -0.2
RNF44Q7L0R7 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13.81□□□□□ -0.2
RNF44Q7L0R7 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF44Q7L0R7 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF44Q7L0R7 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.81□□□□□ -0.2
RNF44Q7L0R7 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.81□□□□□ -0.2
RNF44Q7L0R7 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF44Q7L0R7 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.81□□□□□ -0.2
RNF44Q7L0R7 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 AC239868.1-201ENST00000369385 493 ntBASIC13.8□□□□□ -0.2
RNF44Q7L0R7 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 LBH-202ENST00000401506 485 ntTSL 3 BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 ISCA2P1-201ENST00000425548 448 ntBASIC13.8□□□□□ -0.2
RNF44Q7L0R7 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 AC090857.1-201ENST00000527400 390 ntBASIC13.8□□□□□ -0.2
RNF44Q7L0R7 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 AC008132.1-202ENST00000342005 1389 ntBASIC13.8□□□□□ -0.2
RNF44Q7L0R7 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
RNF44Q7L0R7 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 AP002353.1-201ENST00000528257 1599 ntBASIC13.79□□□□□ -0.2
RNF44Q7L0R7 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF44Q7L0R7 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms