Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RHBDL3P58872 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RHBDL3P58872 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RHBDL3P58872 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RHBDL3P58872 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RHBDL3P58872 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RHBDL3P58872 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RHBDL3P58872 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RHBDL3P58872 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
RHBDL3P58872 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RHBDL3P58872 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC16.72■□□□□ 0.27
RHBDL3P58872 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC16.72■□□□□ 0.27
RHBDL3P58872 EEF1DP2-201ENST00000433698 843 ntBASIC16.72■□□□□ 0.27
RHBDL3P58872 RN7SKP155-201ENST00000516031 288 ntBASIC16.72■□□□□ 0.27
RHBDL3P58872 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC16.72■□□□□ 0.27
RHBDL3P58872 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC16.72■□□□□ 0.27
RHBDL3P58872 AL049840.2-201ENST00000602722 535 ntBASIC16.72■□□□□ 0.27
RHBDL3P58872 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RHBDL3P58872 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC16.72■□□□□ 0.27
RHBDL3P58872 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC16.72■□□□□ 0.27
RHBDL3P58872 AC005912.2-201ENST00000619492 2400 ntBASIC16.72■□□□□ 0.27
RHBDL3P58872 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RHBDL3P58872 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16.72■□□□□ 0.27
RHBDL3P58872 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RHBDL3P58872 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RHBDL3P58872 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RHBDL3P58872 FUCA1P1-201ENST00000374476 1351 ntBASIC16.72■□□□□ 0.27
RHBDL3P58872 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC16.72■□□□□ 0.27
RHBDL3P58872 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
RHBDL3P58872 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RHBDL3P58872 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.72■□□□□ 0.27
RHBDL3P58872 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.72■□□□□ 0.27
RHBDL3P58872 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RHBDL3P58872 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
RHBDL3P58872 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RHBDL3P58872 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.71■□□□□ 0.27
RHBDL3P58872 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RHBDL3P58872 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
RHBDL3P58872 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RHBDL3P58872 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC16.71■□□□□ 0.27
RHBDL3P58872 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RHBDL3P58872 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
RHBDL3P58872 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
RHBDL3P58872 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
RHBDL3P58872 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RHBDL3P58872 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RHBDL3P58872 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RHBDL3P58872 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RHBDL3P58872 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
RHBDL3P58872 BCAS2P2-201ENST00000425064 674 ntBASIC16.71■□□□□ 0.27
RHBDL3P58872 AQP7P5-201ENST00000428759 1049 ntBASIC16.71■□□□□ 0.27
RHBDL3P58872 GCSHP3-201ENST00000431120 391 ntBASIC16.71■□□□□ 0.27
RHBDL3P58872 AQP7P4-201ENST00000447083 1042 ntBASIC16.71■□□□□ 0.27
RHBDL3P58872 AQP7P2-201ENST00000453967 1041 ntBASIC16.71■□□□□ 0.27
RHBDL3P58872 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC16.71■□□□□ 0.27
RHBDL3P58872 AL157792.1-201ENST00000488281 530 ntBASIC16.71■□□□□ 0.27
RHBDL3P58872 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RHBDL3P58872 RPS23-207ENST00000511844 530 ntTSL 2 BASIC16.71■□□□□ 0.27
RHBDL3P58872 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC16.71■□□□□ 0.27
RHBDL3P58872 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RHBDL3P58872 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC16.71■□□□□ 0.27
RHBDL3P58872 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RHBDL3P58872 AC012073.1-201ENST00000606114 1108 ntBASIC16.71■□□□□ 0.27
RHBDL3P58872 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RHBDL3P58872 AC011471.3-201ENST00000623576 402 ntBASIC16.71■□□□□ 0.27
RHBDL3P58872 AQP7P3-201ENST00000624547 1041 ntBASIC16.71■□□□□ 0.27
RHBDL3P58872 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC16.71■□□□□ 0.27
RHBDL3P58872 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RHBDL3P58872 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RHBDL3P58872 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RHBDL3P58872 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RHBDL3P58872 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC16.71■□□□□ 0.27
RHBDL3P58872 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RHBDL3P58872 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RHBDL3P58872 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC16.7■□□□□ 0.26
RHBDL3P58872 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
RHBDL3P58872 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RHBDL3P58872 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC16.7■□□□□ 0.26
RHBDL3P58872 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RHBDL3P58872 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
RHBDL3P58872 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RHBDL3P58872 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RHBDL3P58872 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RHBDL3P58872 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC16.7■□□□□ 0.26
RHBDL3P58872 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RHBDL3P58872 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RHBDL3P58872 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.7■□□□□ 0.26
RHBDL3P58872 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.7■□□□□ 0.26
RHBDL3P58872 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RHBDL3P58872 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC16.7■□□□□ 0.26
RHBDL3P58872 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RHBDL3P58872 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RHBDL3P58872 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC16.7■□□□□ 0.26
RHBDL3P58872 VENTXP3-201ENST00000546480 773 ntBASIC16.7■□□□□ 0.26
RHBDL3P58872 BATF-202ENST00000555504 361 ntTSL 2 BASIC16.7■□□□□ 0.26
RHBDL3P58872 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC16.7■□□□□ 0.26
RHBDL3P58872 C2orf69P1-201ENST00000563532 1093 ntBASIC16.7■□□□□ 0.26
RHBDL3P58872 MIR4472-1-201ENST00000584349 80 ntBASIC16.7■□□□□ 0.26
RHBDL3P58872 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
RHBDL3P58872 BAP1-211ENST00000615113 489 ntBASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms