Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC17.35■□□□□ 0.37
NUP98P52948 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC17.35■□□□□ 0.37
NUP98P52948 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC17.35■□□□□ 0.37
NUP98P52948 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
NUP98P52948 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC17.35■□□□□ 0.37
NUP98P52948 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC17.35■□□□□ 0.37
NUP98P52948 AC112250.1-201ENST00000504640 745 ntBASIC17.35■□□□□ 0.37
NUP98P52948 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC17.35■□□□□ 0.37
NUP98P52948 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC17.35■□□□□ 0.37
NUP98P52948 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NUP98P52948 BAK1P2-201ENST00000532665 631 ntBASIC17.35■□□□□ 0.37
NUP98P52948 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC17.35■□□□□ 0.37
NUP98P52948 MIR4746-201ENST00000579802 71 ntBASIC17.35■□□□□ 0.37
NUP98P52948 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC17.35■□□□□ 0.37
NUP98P52948 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NUP98P52948 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC17.35■□□□□ 0.37
NUP98P52948 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NUP98P52948 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NUP98P52948 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NUP98P52948 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUP98P52948 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC17.35■□□□□ 0.37
NUP98P52948 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC17.35■□□□□ 0.37
NUP98P52948 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUP98P52948 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUP98P52948 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
NUP98P52948 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC17.35■□□□□ 0.37
NUP98P52948 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NUP98P52948 KRT8P42-201ENST00000405771 1399 ntBASIC17.35■□□□□ 0.37
NUP98P52948 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC17.35■□□□□ 0.37
NUP98P52948 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUP98P52948 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUP98P52948 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NUP98P52948 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUP98P52948 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
NUP98P52948 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC17.35■□□□□ 0.37
NUP98P52948 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC17.35■□□□□ 0.37
NUP98P52948 AC092810.2-201ENST00000431570 362 ntBASIC17.35■□□□□ 0.37
NUP98P52948 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC17.35■□□□□ 0.37
NUP98P52948 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC17.35■□□□□ 0.37
NUP98P52948 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC17.35■□□□□ 0.37
NUP98P52948 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC17.35■□□□□ 0.37
NUP98P52948 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC17.35■□□□□ 0.37
NUP98P52948 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
NUP98P52948 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUP98P52948 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUP98P52948 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUP98P52948 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC17.35■□□□□ 0.37
NUP98P52948 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
NUP98P52948 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.34■□□□□ 0.37
NUP98P52948 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUP98P52948 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
NUP98P52948 AC064850.1-201ENST00000413279 1398 ntBASIC17.34■□□□□ 0.37
NUP98P52948 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUP98P52948 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NUP98P52948 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
NUP98P52948 SIRPB3P-201ENST00000340424 1216 ntBASIC17.34■□□□□ 0.37
NUP98P52948 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUP98P52948 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
NUP98P52948 AF274858.1-201ENST00000406288 372 ntBASIC17.34■□□□□ 0.37
NUP98P52948 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC17.34■□□□□ 0.37
NUP98P52948 RPSAP6-201ENST00000417882 882 ntBASIC17.34■□□□□ 0.37
NUP98P52948 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC17.34■□□□□ 0.37
NUP98P52948 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC17.34■□□□□ 0.37
NUP98P52948 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC17.34■□□□□ 0.37
NUP98P52948 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC17.34■□□□□ 0.37
NUP98P52948 KF455155.1-201ENST00000604493 303 ntBASIC17.34■□□□□ 0.37
NUP98P52948 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NUP98P52948 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUP98P52948 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC17.34■□□□□ 0.37
NUP98P52948 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC17.34■□□□□ 0.37
NUP98P52948 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
NUP98P52948 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
NUP98P52948 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUP98P52948 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
NUP98P52948 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUP98P52948 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUP98P52948 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUP98P52948 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUP98P52948 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
NUP98P52948 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUP98P52948 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUP98P52948 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NUP98P52948 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC17.33■□□□□ 0.37
NUP98P52948 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
NUP98P52948 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NUP98P52948 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NUP98P52948 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
NUP98P52948 AC007279.1-201ENST00000448547 837 ntBASIC17.33■□□□□ 0.37
NUP98P52948 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
NUP98P52948 AC005077.3-201ENST00000449614 213 ntBASIC17.33■□□□□ 0.37
NUP98P52948 ANKRD26P1-203ENST00000569528 966 ntBASIC17.33■□□□□ 0.37
NUP98P52948 AC073869.4-201ENST00000620841 800 ntBASIC17.33■□□□□ 0.37
NUP98P52948 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC17.33■□□□□ 0.37
NUP98P52948 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC17.33■□□□□ 0.37
NUP98P52948 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
NUP98P52948 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NUP98P52948 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC17.33■□□□□ 0.37
NUP98P52948 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NUP98P52948 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NUP98P52948 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms