Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PDX1P52945 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
PDX1P52945 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PDX1P52945 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC13.98□□□□□ -0.17
PDX1P52945 BANF1P3-201ENST00000412556 261 ntBASIC13.98□□□□□ -0.17
PDX1P52945 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC13.98□□□□□ -0.17
PDX1P52945 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC13.98□□□□□ -0.17
PDX1P52945 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC13.98□□□□□ -0.17
PDX1P52945 RPL7P35-201ENST00000446943 740 ntBASIC13.98□□□□□ -0.17
PDX1P52945 AC130709.1-201ENST00000484779 1212 ntBASIC13.98□□□□□ -0.17
PDX1P52945 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.98□□□□□ -0.17
PDX1P52945 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC13.98□□□□□ -0.17
PDX1P52945 CTBP2P4-201ENST00000513884 920 ntBASIC13.98□□□□□ -0.17
PDX1P52945 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC13.98□□□□□ -0.17
PDX1P52945 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
PDX1P52945 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC13.98□□□□□ -0.17
PDX1P52945 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
PDX1P52945 SIGLEC18P-201ENST00000602271 909 ntBASIC13.98□□□□□ -0.17
PDX1P52945 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
PDX1P52945 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC13.98□□□□□ -0.17
PDX1P52945 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PDX1P52945 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.98□□□□□ -0.17
PDX1P52945 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PDX1P52945 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PDX1P52945 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
PDX1P52945 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PDX1P52945 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
PDX1P52945 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.98□□□□□ -0.17
PDX1P52945 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PDX1P52945 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
PDX1P52945 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PDX1P52945 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
PDX1P52945 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PDX1P52945 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.98□□□□□ -0.17
PDX1P52945 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDX1P52945 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDX1P52945 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
PDX1P52945 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
PDX1P52945 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC13.97□□□□□ -0.17
PDX1P52945 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDX1P52945 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
PDX1P52945 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDX1P52945 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDX1P52945 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDX1P52945 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDX1P52945 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PDX1P52945 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDX1P52945 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.97□□□□□ -0.17
PDX1P52945 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDX1P52945 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDX1P52945 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PDX1P52945 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PDX1P52945 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.97□□□□□ -0.17
PDX1P52945 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.97□□□□□ -0.17
PDX1P52945 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.97□□□□□ -0.17
PDX1P52945 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
PDX1P52945 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDX1P52945 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDX1P52945 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDX1P52945 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDX1P52945 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.97□□□□□ -0.17
PDX1P52945 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PDX1P52945 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC13.97□□□□□ -0.17
PDX1P52945 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC13.97□□□□□ -0.17
PDX1P52945 AL592076.1-201ENST00000424448 303 ntBASIC13.97□□□□□ -0.17
PDX1P52945 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC13.97□□□□□ -0.17
PDX1P52945 RPSAP15-201ENST00000448168 861 ntBASIC13.97□□□□□ -0.17
PDX1P52945 RPL18AP3-201ENST00000462885 528 ntBASIC13.97□□□□□ -0.17
PDX1P52945 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC13.97□□□□□ -0.17
PDX1P52945 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
PDX1P52945 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC13.97□□□□□ -0.17
PDX1P52945 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
PDX1P52945 CMC2-224ENST00000630396 481 ntTSL 5 BASIC13.97□□□□□ -0.17
PDX1P52945 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PDX1P52945 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDX1P52945 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC13.97□□□□□ -0.17
PDX1P52945 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDX1P52945 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
PDX1P52945 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.97□□□□□ -0.17
PDX1P52945 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDX1P52945 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
PDX1P52945 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDX1P52945 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
PDX1P52945 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDX1P52945 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PDX1P52945 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PDX1P52945 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
PDX1P52945 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PDX1P52945 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PDX1P52945 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
PDX1P52945 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PDX1P52945 AHCYP4-201ENST00000419201 1315 ntBASIC13.96□□□□□ -0.17
PDX1P52945 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC13.96□□□□□ -0.17
PDX1P52945 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PDX1P52945 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PDX1P52945 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PDX1P52945 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PDX1P52945 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PDX1P52945 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PDX1P52945 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms