Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 AC011498.7-201ENST00000624986 2027 ntBASIC12.5□□□□□ -0.41
CBX5P45973 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CBX5P45973 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CBX5P45973 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.5□□□□□ -0.41
CBX5P45973 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CBX5P45973 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
CBX5P45973 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CBX5P45973 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
CBX5P45973 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CBX5P45973 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CBX5P45973 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CBX5P45973 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CBX5P45973 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CBX5P45973 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CBX5P45973 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.49□□□□□ -0.41
CBX5P45973 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CBX5P45973 EXTL2-207ENST00000535414 3146 ntTSL 5 BASIC12.49□□□□□ -0.41
CBX5P45973 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
CBX5P45973 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
CBX5P45973 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.49□□□□□ -0.41
CBX5P45973 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CBX5P45973 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CBX5P45973 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CBX5P45973 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CBX5P45973 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CBX5P45973 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CBX5P45973 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CBX5P45973 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.49□□□□□ -0.41
CBX5P45973 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CBX5P45973 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CBX5P45973 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.49□□□□□ -0.41
CBX5P45973 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CBX5P45973 BTBD7P1-201ENST00000447253 1453 ntBASIC12.49□□□□□ -0.41
CBX5P45973 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CBX5P45973 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CBX5P45973 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CBX5P45973 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
CBX5P45973 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CBX5P45973 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.49□□□□□ -0.41
CBX5P45973 MIR574-201ENST00000385209 96 ntBASIC12.49□□□□□ -0.41
CBX5P45973 FABP5-202ENST00000396359 986 ntTSL 5 BASIC12.49□□□□□ -0.41
CBX5P45973 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.49□□□□□ -0.41
CBX5P45973 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.49□□□□□ -0.41
CBX5P45973 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC12.49□□□□□ -0.41
CBX5P45973 CNN2P2-201ENST00000443536 909 ntBASIC12.49□□□□□ -0.41
CBX5P45973 CNN2P3-201ENST00000450201 906 ntBASIC12.49□□□□□ -0.41
CBX5P45973 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.49□□□□□ -0.41
CBX5P45973 FAM86LP-201ENST00000478302 853 ntBASIC12.49□□□□□ -0.41
CBX5P45973 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
CBX5P45973 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.49□□□□□ -0.41
CBX5P45973 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.49□□□□□ -0.41
CBX5P45973 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC12.49□□□□□ -0.41
CBX5P45973 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.49□□□□□ -0.41
CBX5P45973 AL136317.3-201ENST00000618497 906 ntBASIC12.49□□□□□ -0.41
CBX5P45973 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CBX5P45973 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CBX5P45973 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CBX5P45973 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CBX5P45973 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CBX5P45973 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CBX5P45973 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CBX5P45973 MDGA1-207ENST00000505425 3021 ntTSL 5 BASIC12.49□□□□□ -0.41
CBX5P45973 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CBX5P45973 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.49□□□□□ -0.41
CBX5P45973 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CBX5P45973 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
CBX5P45973 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.49□□□□□ -0.41
CBX5P45973 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC12.49□□□□□ -0.41
CBX5P45973 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC12.48□□□□□ -0.41
CBX5P45973 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC12.48□□□□□ -0.41
CBX5P45973 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
CBX5P45973 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CBX5P45973 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
CBX5P45973 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.48□□□□□ -0.41
CBX5P45973 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.48□□□□□ -0.41
CBX5P45973 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CBX5P45973 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CBX5P45973 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CBX5P45973 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CBX5P45973 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CBX5P45973 FUBP1-202ENST00000370767 2524 ntTSL 5 BASIC12.48□□□□□ -0.41
CBX5P45973 AC111170.3-201ENST00000624282 2464 ntBASIC12.48□□□□□ -0.41
CBX5P45973 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CBX5P45973 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.48□□□□□ -0.41
CBX5P45973 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CBX5P45973 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
CBX5P45973 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CBX5P45973 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CBX5P45973 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CBX5P45973 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC12.48□□□□□ -0.41
CBX5P45973 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CBX5P45973 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CBX5P45973 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC12.48□□□□□ -0.41
CBX5P45973 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CBX5P45973 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CBX5P45973 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CBX5P45973 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CBX5P45973 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CBX5P45973 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CBX5P45973 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms