Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
HMGCLP35914 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.27□□□□□ -0.12
HMGCLP35914 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HMGCLP35914 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HMGCLP35914 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
HMGCLP35914 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.27□□□□□ -0.12
HMGCLP35914 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
HMGCLP35914 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.27□□□□□ -0.12
HMGCLP35914 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
HMGCLP35914 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.27□□□□□ -0.12
HMGCLP35914 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HMGCLP35914 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HMGCLP35914 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
HMGCLP35914 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC14.27□□□□□ -0.12
HMGCLP35914 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.27□□□□□ -0.12
HMGCLP35914 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
HMGCLP35914 AL590824.1-201ENST00000403828 1349 ntBASIC14.27□□□□□ -0.12
HMGCLP35914 LINC00115-201ENST00000473798 1317 ntBASIC14.27□□□□□ -0.12
HMGCLP35914 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGCLP35914 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGCLP35914 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.27□□□□□ -0.13
HMGCLP35914 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
HMGCLP35914 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HMGCLP35914 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGCLP35914 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HMGCLP35914 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HMGCLP35914 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
HMGCLP35914 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.27□□□□□ -0.13
HMGCLP35914 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
HMGCLP35914 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC14.27□□□□□ -0.13
HMGCLP35914 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
HMGCLP35914 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
HMGCLP35914 CALR4P-201ENST00000431943 946 ntBASIC14.27□□□□□ -0.13
HMGCLP35914 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.27□□□□□ -0.13
HMGCLP35914 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGCLP35914 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.27□□□□□ -0.13
HMGCLP35914 RN7SL277P-201ENST00000481521 288 ntBASIC14.27□□□□□ -0.13
HMGCLP35914 HIST2H2BC-201ENST00000498492 580 ntBASIC14.27□□□□□ -0.13
HMGCLP35914 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC14.27□□□□□ -0.13
HMGCLP35914 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.27□□□□□ -0.13
HMGCLP35914 AC090857.1-201ENST00000527400 390 ntBASIC14.27□□□□□ -0.13
HMGCLP35914 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.27□□□□□ -0.13
HMGCLP35914 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.27□□□□□ -0.13
HMGCLP35914 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.27□□□□□ -0.13
HMGCLP35914 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.27□□□□□ -0.13
HMGCLP35914 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC14.27□□□□□ -0.13
HMGCLP35914 AC091544.8-201ENST00000619490 361 ntBASIC14.27□□□□□ -0.13
HMGCLP35914 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC14.27□□□□□ -0.13
HMGCLP35914 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGCLP35914 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.27□□□□□ -0.13
HMGCLP35914 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
HMGCLP35914 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGCLP35914 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGCLP35914 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGCLP35914 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGCLP35914 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGCLP35914 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HMGCLP35914 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGCLP35914 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGCLP35914 BRD7P5-201ENST00000299197 1822 ntBASIC14.27□□□□□ -0.13
HMGCLP35914 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGCLP35914 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
HMGCLP35914 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.27□□□□□ -0.13
HMGCLP35914 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HMGCLP35914 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCLP35914 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCLP35914 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCLP35914 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCLP35914 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.26□□□□□ -0.13
HMGCLP35914 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCLP35914 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCLP35914 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
HMGCLP35914 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCLP35914 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.26□□□□□ -0.13
HMGCLP35914 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCLP35914 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.26□□□□□ -0.13
HMGCLP35914 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.26□□□□□ -0.13
HMGCLP35914 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCLP35914 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCLP35914 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
HMGCLP35914 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCLP35914 DEF8-202ENST00000418391 852 ntTSL 2 BASIC14.26□□□□□ -0.13
HMGCLP35914 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCLP35914 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.26□□□□□ -0.13
HMGCLP35914 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.26□□□□□ -0.13
HMGCLP35914 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCLP35914 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.26□□□□□ -0.13
HMGCLP35914 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC14.26□□□□□ -0.13
HMGCLP35914 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCLP35914 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.26□□□□□ -0.13
HMGCLP35914 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCLP35914 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.26□□□□□ -0.13
HMGCLP35914 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC14.26□□□□□ -0.13
HMGCLP35914 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
HMGCLP35914 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
HMGCLP35914 AC103810.3-201ENST00000583567 96 ntBASIC14.26□□□□□ -0.13
HMGCLP35914 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.26□□□□□ -0.13
HMGCLP35914 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
HMGCLP35914 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCLP35914 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms