Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
CKS2P33552 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CKS2P33552 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
CKS2P33552 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CKS2P33552 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CKS2P33552 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC10.63□□□□□ -0.71
CKS2P33552 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CKS2P33552 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CKS2P33552 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CKS2P33552 NBN-201ENST00000265433 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CKS2P33552 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
CKS2P33552 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CKS2P33552 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
CKS2P33552 RAD18-204ENST00000418463 563 ntTSL 4 BASIC10.63□□□□□ -0.71
CKS2P33552 RAD18-205ENST00000421052 582 ntTSL 3 BASIC10.63□□□□□ -0.71
CKS2P33552 RBPMS2P1-201ENST00000437762 623 ntBASIC10.63□□□□□ -0.71
CKS2P33552 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC10.63□□□□□ -0.71
CKS2P33552 GAPDHP40-201ENST00000505218 1006 ntBASIC10.63□□□□□ -0.71
CKS2P33552 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC10.63□□□□□ -0.71
CKS2P33552 AC040169.1-201ENST00000565382 521 ntBASIC10.63□□□□□ -0.71
CKS2P33552 COX5A-206ENST00000568783 571 ntTSL 3 BASIC10.63□□□□□ -0.71
CKS2P33552 AC104692.2-201ENST00000603054 253 ntBASIC10.63□□□□□ -0.71
CKS2P33552 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CKS2P33552 AC105339.1-204ENST00000636249 355 ntBASIC10.63□□□□□ -0.71
CKS2P33552 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CKS2P33552 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CKS2P33552 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CKS2P33552 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
CKS2P33552 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC10.63□□□□□ -0.71
CKS2P33552 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CKS2P33552 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
CKS2P33552 AL023775.1-201ENST00000454907 1746 ntBASIC10.63□□□□□ -0.71
CKS2P33552 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CKS2P33552 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
CKS2P33552 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC10.63□□□□□ -0.71
CKS2P33552 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
CKS2P33552 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CKS2P33552 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CKS2P33552 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
CKS2P33552 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CKS2P33552 GOLGA6L17P-202ENST00000614358 1398 ntBASIC10.63□□□□□ -0.71
CKS2P33552 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC10.63□□□□□ -0.71
CKS2P33552 TBL1X-206ENST00000424279 5451 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
CKS2P33552 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC10.63□□□□□ -0.71
CKS2P33552 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC10.63□□□□□ -0.71
CKS2P33552 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CKS2P33552 ZNF646-201ENST00000300850 6892 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
CKS2P33552 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC10.62□□□□□ -0.71
CKS2P33552 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CKS2P33552 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CKS2P33552 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC10.62□□□□□ -0.71
CKS2P33552 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
CKS2P33552 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
CKS2P33552 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CKS2P33552 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
CKS2P33552 COX18-201ENST00000295890 6846 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
CKS2P33552 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
CKS2P33552 MARK2P9-201ENST00000430958 1727 ntBASIC10.62□□□□□ -0.71
CKS2P33552 C4orf33-201ENST00000281146 6170 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CKS2P33552 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CKS2P33552 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC10.62□□□□□ -0.71
CKS2P33552 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC10.62□□□□□ -0.71
CKS2P33552 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC10.62□□□□□ -0.71
CKS2P33552 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CKS2P33552 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
CKS2P33552 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CKS2P33552 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CKS2P33552 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
CKS2P33552 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CKS2P33552 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CKS2P33552 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CKS2P33552 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC10.62□□□□□ -0.71
CKS2P33552 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CKS2P33552 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC10.62□□□□□ -0.71
CKS2P33552 MPV17-208ENST00000405076 603 ntTSL 5 BASIC10.62□□□□□ -0.71
CKS2P33552 MED15P5-201ENST00000423150 992 ntBASIC10.62□□□□□ -0.71
CKS2P33552 AC004832.2-201ENST00000426397 482 ntBASIC10.62□□□□□ -0.71
CKS2P33552 RN7SL618P-201ENST00000477850 296 ntBASIC10.62□□□□□ -0.71
CKS2P33552 SDHAP3-202ENST00000515467 728 ntBASIC10.62□□□□□ -0.71
CKS2P33552 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC10.62□□□□□ -0.71
CKS2P33552 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
CKS2P33552 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC10.62□□□□□ -0.71
CKS2P33552 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
CKS2P33552 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC10.62□□□□□ -0.71
CKS2P33552 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC10.62□□□□□ -0.71
CKS2P33552 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC10.62□□□□□ -0.71
CKS2P33552 DUX4L47-201ENST00000566374 394 ntBASIC10.62□□□□□ -0.71
CKS2P33552 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC10.62□□□□□ -0.71
CKS2P33552 MIR4453-201ENST00000584019 89 ntBASIC10.62□□□□□ -0.71
CKS2P33552 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CKS2P33552 AC027601.4-201ENST00000611259 610 ntBASIC10.62□□□□□ -0.71
CKS2P33552 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC10.62□□□□□ -0.71
CKS2P33552 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC10.62□□□□□ -0.71
CKS2P33552 AL109936.8-201ENST00000641772 604 ntBASIC10.62□□□□□ -0.71
CKS2P33552 GEMIN5-201ENST00000285873 5397 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CKS2P33552 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CKS2P33552 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CKS2P33552 NBPF1-203ENST00000430580 5932 ntAPPRIS P5 TSL 5 BASIC10.62□□□□□ -0.71
CKS2P33552 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CKS2P33552 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms