Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC15.75■□□□□ 0.11
CTGFP29279 MIR611-201ENST00000384869 67 ntBASIC15.75■□□□□ 0.11
CTGFP29279 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CTGFP29279 AC010086.2-201ENST00000428616 226 ntBASIC15.75■□□□□ 0.11
CTGFP29279 OR4C14P-201ENST00000440929 923 ntBASIC15.75■□□□□ 0.11
CTGFP29279 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CTGFP29279 AC007679.1-201ENST00000458609 502 ntBASIC15.75■□□□□ 0.11
CTGFP29279 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC15.75■□□□□ 0.11
CTGFP29279 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC15.75■□□□□ 0.11
CTGFP29279 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC15.75■□□□□ 0.11
CTGFP29279 CCND3P2-201ENST00000579393 537 ntBASIC15.75■□□□□ 0.11
CTGFP29279 RN7SL478P-201ENST00000584358 298 ntBASIC15.75■□□□□ 0.11
CTGFP29279 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC15.75■□□□□ 0.11
CTGFP29279 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTGFP29279 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTGFP29279 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CTGFP29279 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
CTGFP29279 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTGFP29279 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTGFP29279 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.75■□□□□ 0.11
CTGFP29279 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.75■□□□□ 0.11
CTGFP29279 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC15.75■□□□□ 0.11
CTGFP29279 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTGFP29279 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.75■□□□□ 0.11
CTGFP29279 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTGFP29279 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTGFP29279 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.74■□□□□ 0.11
CTGFP29279 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.74■□□□□ 0.11
CTGFP29279 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTGFP29279 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTGFP29279 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CTGFP29279 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTGFP29279 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTGFP29279 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CTGFP29279 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CTGFP29279 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.74■□□□□ 0.11
CTGFP29279 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CTGFP29279 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTGFP29279 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.74■□□□□ 0.11
CTGFP29279 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTGFP29279 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CTGFP29279 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTGFP29279 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CTGFP29279 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTGFP29279 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC15.74■□□□□ 0.11
CTGFP29279 RN7SL173P-201ENST00000461853 292 ntBASIC15.74■□□□□ 0.11
CTGFP29279 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC15.74■□□□□ 0.11
CTGFP29279 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC15.74■□□□□ 0.11
CTGFP29279 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC15.74■□□□□ 0.11
CTGFP29279 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC15.74■□□□□ 0.11
CTGFP29279 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC15.74■□□□□ 0.11
CTGFP29279 AC010202.1-201ENST00000551181 405 ntBASIC15.74■□□□□ 0.11
CTGFP29279 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC15.74■□□□□ 0.11
CTGFP29279 PRR20FP-201ENST00000603320 180 ntBASIC15.74■□□□□ 0.11
CTGFP29279 AC020922.4-201ENST00000621389 339 ntBASIC15.74■□□□□ 0.11
CTGFP29279 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
CTGFP29279 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC15.74■□□□□ 0.11
CTGFP29279 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.74■□□□□ 0.11
CTGFP29279 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTGFP29279 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CTGFP29279 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC15.74■□□□□ 0.11
CTGFP29279 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTGFP29279 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTGFP29279 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTGFP29279 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTGFP29279 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTGFP29279 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTGFP29279 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CTGFP29279 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTGFP29279 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTGFP29279 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTGFP29279 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTGFP29279 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC15.73■□□□□ 0.11
CTGFP29279 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CTGFP29279 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.73■□□□□ 0.11
CTGFP29279 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTGFP29279 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTGFP29279 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTGFP29279 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
CTGFP29279 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CTGFP29279 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
CTGFP29279 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.73■□□□□ 0.11
CTGFP29279 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTGFP29279 RN7SL832P-201ENST00000607781 1756 ntBASIC15.73■□□□□ 0.11
CTGFP29279 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CTGFP29279 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.73■□□□□ 0.11
CTGFP29279 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CTGFP29279 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTGFP29279 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CTGFP29279 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CTGFP29279 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC15.73■□□□□ 0.11
CTGFP29279 AC005722.1-201ENST00000431878 964 ntBASIC15.73■□□□□ 0.11
CTGFP29279 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC15.73■□□□□ 0.11
CTGFP29279 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC15.73■□□□□ 0.11
CTGFP29279 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.73■□□□□ 0.11
CTGFP29279 AC104212.2-201ENST00000478813 628 ntBASIC15.73■□□□□ 0.11
CTGFP29279 MARK2P17-201ENST00000498560 841 ntBASIC15.73■□□□□ 0.11
CTGFP29279 AC233724.9-201ENST00000511694 407 ntBASIC15.73■□□□□ 0.11
CTGFP29279 AC022447.6-201ENST00000515522 438 ntBASIC15.73■□□□□ 0.11
CTGFP29279 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms