Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 SNORA50D-202ENST00000627561 132 ntBASIC24.18■■□□□ 1.46
TOP2AP11388 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC24.18■■□□□ 1.46
TOP2AP11388 AL050341.2-201ENST00000567508 1541 ntBASIC24.18■■□□□ 1.46
TOP2AP11388 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TOP2AP11388 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC24.18■■□□□ 1.46
TOP2AP11388 AC140479.7-201ENST00000636301 2332 ntBASIC24.18■■□□□ 1.46
TOP2AP11388 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC24.18■■□□□ 1.46
TOP2AP11388 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
TOP2AP11388 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC24.18■■□□□ 1.46
TOP2AP11388 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
TOP2AP11388 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TOP2AP11388 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TOP2AP11388 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
TOP2AP11388 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TOP2AP11388 AC245140.2-201ENST00000624054 1939 ntBASIC24.17■■□□□ 1.46
TOP2AP11388 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC24.17■■□□□ 1.46
TOP2AP11388 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC24.17■■□□□ 1.46
TOP2AP11388 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC24.17■■□□□ 1.46
TOP2AP11388 AC104212.2-201ENST00000478813 628 ntBASIC24.17■■□□□ 1.46
TOP2AP11388 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC24.17■■□□□ 1.46
TOP2AP11388 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC24.17■■□□□ 1.46
TOP2AP11388 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TOP2AP11388 AL356740.1-201ENST00000602192 1297 ntBASIC24.17■■□□□ 1.46
TOP2AP11388 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
TOP2AP11388 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TOP2AP11388 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC24.17■■□□□ 1.46
TOP2AP11388 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC24.17■■□□□ 1.46
TOP2AP11388 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
TOP2AP11388 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC24.17■■□□□ 1.46
TOP2AP11388 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC24.16■■□□□ 1.46
TOP2AP11388 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TOP2AP11388 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC24.16■■□□□ 1.46
TOP2AP11388 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC24.16■■□□□ 1.46
TOP2AP11388 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC24.16■■□□□ 1.46
TOP2AP11388 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC24.16■■□□□ 1.46
TOP2AP11388 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC24.16■■□□□ 1.46
TOP2AP11388 AC009041.4-201ENST00000620075 638 ntBASIC24.16■■□□□ 1.46
TOP2AP11388 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TOP2AP11388 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
TOP2AP11388 AL513497.1-201ENST00000624273 2083 ntBASIC24.16■■□□□ 1.46
TOP2AP11388 BX640514.1-201ENST00000583223 1918 ntBASIC24.16■■□□□ 1.46
TOP2AP11388 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC24.16■■□□□ 1.46
TOP2AP11388 AC061965.1-201ENST00000560524 1465 ntBASIC24.16■■□□□ 1.46
TOP2AP11388 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
TOP2AP11388 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
TOP2AP11388 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
TOP2AP11388 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
TOP2AP11388 AC040160.2-201ENST00000623816 1675 ntBASIC24.16■■□□□ 1.46
TOP2AP11388 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC24.16■■□□□ 1.46
TOP2AP11388 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC24.16■■□□□ 1.46
TOP2AP11388 CICP16-201ENST00000502609 2813 ntBASIC24.16■■□□□ 1.46
TOP2AP11388 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TOP2AP11388 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
TOP2AP11388 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC24.16■■□□□ 1.46
TOP2AP11388 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TOP2AP11388 AC000077.1-201ENST00000420012 953 ntBASIC24.15■■□□□ 1.46
TOP2AP11388 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TOP2AP11388 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC24.15■■□□□ 1.46
TOP2AP11388 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC24.15■■□□□ 1.46
TOP2AP11388 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TOP2AP11388 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC24.15■■□□□ 1.46
TOP2AP11388 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC24.15■■□□□ 1.46
TOP2AP11388 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC24.15■■□□□ 1.46
TOP2AP11388 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC24.15■■□□□ 1.46
TOP2AP11388 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
TOP2AP11388 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TOP2AP11388 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC24.15■■□□□ 1.46
TOP2AP11388 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TOP2AP11388 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TOP2AP11388 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TOP2AP11388 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TOP2AP11388 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TOP2AP11388 AC097359.2-201ENST00000604992 2389 ntBASIC24.15■■□□□ 1.46
TOP2AP11388 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
TOP2AP11388 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC24.15■■□□□ 1.46
TOP2AP11388 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TOP2AP11388 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TOP2AP11388 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC24.15■■□□□ 1.46
TOP2AP11388 SDCBP2P1-201ENST00000416115 614 ntBASIC24.15■■□□□ 1.46
TOP2AP11388 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TOP2AP11388 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC24.15■■□□□ 1.46
TOP2AP11388 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC24.15■■□□□ 1.46
TOP2AP11388 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC24.15■■□□□ 1.46
TOP2AP11388 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC24.15■■□□□ 1.46
TOP2AP11388 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
TOP2AP11388 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
TOP2AP11388 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
TOP2AP11388 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
TOP2AP11388 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
TOP2AP11388 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
TOP2AP11388 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
TOP2AP11388 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC24.14■■□□□ 1.45
TOP2AP11388 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC24.14■■□□□ 1.45
TOP2AP11388 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC24.14■■□□□ 1.45
TOP2AP11388 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
TOP2AP11388 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC24.14■■□□□ 1.45
TOP2AP11388 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC24.14■■□□□ 1.45
TOP2AP11388 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC24.14■■□□□ 1.45
TOP2AP11388 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC24.14■■□□□ 1.45
TOP2AP11388 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC24.14■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms