Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM2P07951 INTS4P2-202ENST00000614726 2019 ntBASIC16.48■□□□□ 0.23
TPM2P07951 AC011498.7-201ENST00000624986 2027 ntBASIC16.48■□□□□ 0.23
TPM2P07951 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM2P07951 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM2P07951 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.48■□□□□ 0.23
TPM2P07951 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TPM2P07951 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC16.48■□□□□ 0.23
TPM2P07951 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM2P07951 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM2P07951 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TPM2P07951 AL357140.3-201ENST00000639753 1983 ntBASIC16.47■□□□□ 0.23
TPM2P07951 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC16.47■□□□□ 0.23
TPM2P07951 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TPM2P07951 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
TPM2P07951 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
TPM2P07951 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC16.47■□□□□ 0.23
TPM2P07951 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TPM2P07951 MEX3B-202ENST00000558133 4333 ntBASIC16.47■□□□□ 0.23
TPM2P07951 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TPM2P07951 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.47■□□□□ 0.23
TPM2P07951 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.47■□□□□ 0.23
TPM2P07951 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.47■□□□□ 0.23
TPM2P07951 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TPM2P07951 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TPM2P07951 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
TPM2P07951 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.47■□□□□ 0.23
TPM2P07951 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TPM2P07951 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TPM2P07951 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.47■□□□□ 0.23
TPM2P07951 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.47■□□□□ 0.23
TPM2P07951 AC136604.1-202ENST00000425471 771 ntBASIC16.47■□□□□ 0.23
TPM2P07951 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.47■□□□□ 0.23
TPM2P07951 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
TPM2P07951 AC004890.2-204ENST00000481968 304 ntBASIC16.47■□□□□ 0.23
TPM2P07951 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TPM2P07951 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TPM2P07951 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.47■□□□□ 0.23
TPM2P07951 GOLGA8IP-202ENST00000611635 2100 ntBASIC16.47■□□□□ 0.23
TPM2P07951 PRSS30P-206ENST00000641773 873 ntBASIC16.47■□□□□ 0.23
TPM2P07951 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TPM2P07951 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TPM2P07951 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TPM2P07951 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TPM2P07951 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.47■□□□□ 0.23
TPM2P07951 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TPM2P07951 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TPM2P07951 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC16.47■□□□□ 0.23
TPM2P07951 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TPM2P07951 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TPM2P07951 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
TPM2P07951 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TPM2P07951 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TPM2P07951 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TPM2P07951 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.47■□□□□ 0.23
TPM2P07951 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
TPM2P07951 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
TPM2P07951 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TPM2P07951 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TPM2P07951 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TPM2P07951 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TPM2P07951 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TPM2P07951 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TPM2P07951 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TPM2P07951 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC16.46■□□□□ 0.23
TPM2P07951 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.46■□□□□ 0.23
TPM2P07951 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
TPM2P07951 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TPM2P07951 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TPM2P07951 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TPM2P07951 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TPM2P07951 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.46■□□□□ 0.23
TPM2P07951 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TPM2P07951 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC16.46■□□□□ 0.23
TPM2P07951 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TPM2P07951 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TPM2P07951 SPDYE19P-201ENST00000338590 713 ntBASIC16.46■□□□□ 0.23
TPM2P07951 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
TPM2P07951 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.46■□□□□ 0.23
TPM2P07951 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.46■□□□□ 0.23
TPM2P07951 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TPM2P07951 BASP1P1-201ENST00000430708 665 ntBASIC16.46■□□□□ 0.23
TPM2P07951 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.46■□□□□ 0.23
TPM2P07951 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.46■□□□□ 0.23
TPM2P07951 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.46■□□□□ 0.23
TPM2P07951 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TPM2P07951 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TPM2P07951 AC023310.3-201ENST00000557027 670 ntBASIC16.46■□□□□ 0.23
TPM2P07951 AC100756.1-201ENST00000562736 682 ntBASIC16.46■□□□□ 0.23
TPM2P07951 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.46■□□□□ 0.23
TPM2P07951 AC120045.2-201ENST00000567334 178 ntBASIC16.46■□□□□ 0.23
TPM2P07951 AC138749.3-201ENST00000567691 622 ntBASIC16.46■□□□□ 0.23
TPM2P07951 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.46■□□□□ 0.23
TPM2P07951 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TPM2P07951 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.46■□□□□ 0.23
TPM2P07951 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.46■□□□□ 0.23
TPM2P07951 AC116165.1-201ENST00000611806 668 ntBASIC16.46■□□□□ 0.23
TPM2P07951 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.46■□□□□ 0.23
TPM2P07951 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.46■□□□□ 0.23
TPM2P07951 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms