Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 AC005014.1-201ENST00000432006 2976 ntBASIC12.23□□□□□ -0.45
HLA-AP01891 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC12.23□□□□□ -0.45
HLA-AP01891 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
HLA-AP01891 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HLA-AP01891 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
HLA-AP01891 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HLA-AP01891 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HLA-AP01891 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HLA-AP01891 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
HLA-AP01891 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HLA-AP01891 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
HLA-AP01891 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-AP01891 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-AP01891 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-AP01891 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
HLA-AP01891 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-AP01891 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-AP01891 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-AP01891 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
HLA-AP01891 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-AP01891 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-AP01891 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-AP01891 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
HLA-AP01891 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-AP01891 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-AP01891 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-AP01891 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-AP01891 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.22□□□□□ -0.45
HLA-AP01891 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-AP01891 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-AP01891 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-AP01891 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-AP01891 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC12.22□□□□□ -0.45
HLA-AP01891 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC12.22□□□□□ -0.45
HLA-AP01891 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.22□□□□□ -0.45
HLA-AP01891 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-AP01891 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
HLA-AP01891 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-AP01891 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-AP01891 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
HLA-AP01891 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
HLA-AP01891 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-AP01891 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
HLA-AP01891 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-AP01891 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.22□□□□□ -0.45
HLA-AP01891 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.22□□□□□ -0.45
HLA-AP01891 AC055876.3-201ENST00000431496 288 ntBASIC12.22□□□□□ -0.45
HLA-AP01891 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC12.22□□□□□ -0.45
HLA-AP01891 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-AP01891 RN7SL618P-201ENST00000477850 296 ntBASIC12.22□□□□□ -0.45
HLA-AP01891 AC093214.1-201ENST00000511688 1107 ntBASIC12.22□□□□□ -0.45
HLA-AP01891 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-AP01891 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.22□□□□□ -0.45
HLA-AP01891 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.22□□□□□ -0.45
HLA-AP01891 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-AP01891 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC12.22□□□□□ -0.45
HLA-AP01891 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.22□□□□□ -0.45
HLA-AP01891 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC12.22□□□□□ -0.45
HLA-AP01891 AL390955.2-201ENST00000603032 514 ntBASIC12.22□□□□□ -0.45
HLA-AP01891 AL158211.3-201ENST00000607385 239 ntBASIC12.22□□□□□ -0.45
HLA-AP01891 AC138649.4-201ENST00000612222 287 ntBASIC12.22□□□□□ -0.45
HLA-AP01891 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
HLA-AP01891 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.22□□□□□ -0.45
HLA-AP01891 ORC5-208ENST00000626700 344 ntTSL 3 BASIC12.22□□□□□ -0.45
HLA-AP01891 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-AP01891 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
HLA-AP01891 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.22□□□□□ -0.45
HLA-AP01891 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-AP01891 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-AP01891 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-AP01891 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC12.22□□□□□ -0.45
HLA-AP01891 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.22□□□□□ -0.45
HLA-AP01891 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.22□□□□□ -0.45
HLA-AP01891 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-AP01891 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-AP01891 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-AP01891 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC12.22□□□□□ -0.45
HLA-AP01891 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-AP01891 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.21□□□□□ -0.45
HLA-AP01891 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-AP01891 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
HLA-AP01891 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-AP01891 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-AP01891 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-AP01891 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-AP01891 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-AP01891 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
HLA-AP01891 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
HLA-AP01891 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-AP01891 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-AP01891 VENTXP1-201ENST00000569334 2716 ntBASIC12.21□□□□□ -0.45
HLA-AP01891 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-AP01891 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-AP01891 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
HLA-AP01891 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
HLA-AP01891 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-AP01891 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-AP01891 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-AP01891 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.45
HLA-AP01891 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms