Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC11.13□□□□□ -0.63
TRBV12-3P01733 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
TRBV12-3P01733 AC020914.3-201ENST00000594712 304 ntBASIC11.13□□□□□ -0.63
TRBV12-3P01733 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
TRBV12-3P01733 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRBV12-3P01733 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC11.13□□□□□ -0.63
TRBV12-3P01733 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRBV12-3P01733 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC11.13□□□□□ -0.63
TRBV12-3P01733 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TRBV12-3P01733 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRBV12-3P01733 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
TRBV12-3P01733 OS9-204ENST00000389146 2091 ntTSL 2 BASIC11.13□□□□□ -0.63
TRBV12-3P01733 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC11.13□□□□□ -0.63
TRBV12-3P01733 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRBV12-3P01733 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRBV12-3P01733 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TRBV12-3P01733 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TRBV12-3P01733 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TRBV12-3P01733 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TRBV12-3P01733 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
TRBV12-3P01733 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRBV12-3P01733 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
TRBV12-3P01733 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRBV12-3P01733 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC11.13□□□□□ -0.63
TRBV12-3P01733 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TRBV12-3P01733 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC11.13□□□□□ -0.63
TRBV12-3P01733 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRBV12-3P01733 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TRBV12-3P01733 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC11.12□□□□□ -0.63
TRBV12-3P01733 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC11.12□□□□□ -0.63
TRBV12-3P01733 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TRBV12-3P01733 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRBV12-3P01733 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRBV12-3P01733 AHCYP4-201ENST00000419201 1315 ntBASIC11.12□□□□□ -0.63
TRBV12-3P01733 TUBB8P4-201ENST00000511806 1324 ntBASIC11.12□□□□□ -0.63
TRBV12-3P01733 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TRBV12-3P01733 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRBV12-3P01733 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRBV12-3P01733 AP002353.1-201ENST00000528257 1599 ntBASIC11.12□□□□□ -0.63
TRBV12-3P01733 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TRBV12-3P01733 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRBV12-3P01733 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TRBV12-3P01733 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC11.12□□□□□ -0.63
TRBV12-3P01733 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC11.12□□□□□ -0.63
TRBV12-3P01733 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRBV12-3P01733 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC11.12□□□□□ -0.63
TRBV12-3P01733 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRBV12-3P01733 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
TRBV12-3P01733 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
TRBV12-3P01733 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRBV12-3P01733 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC11.12□□□□□ -0.63
TRBV12-3P01733 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC11.12□□□□□ -0.63
TRBV12-3P01733 AGER-203ENST00000375065 665 ntTSL 2 BASIC11.12□□□□□ -0.63
TRBV12-3P01733 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
TRBV12-3P01733 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC11.12□□□□□ -0.63
TRBV12-3P01733 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
TRBV12-3P01733 SLC16A6P1-201ENST00000413214 1059 ntBASIC11.12□□□□□ -0.63
TRBV12-3P01733 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC11.12□□□□□ -0.63
TRBV12-3P01733 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRBV12-3P01733 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRBV12-3P01733 OARD1-204ENST00000464633 717 ntTSL 2 BASIC11.12□□□□□ -0.63
TRBV12-3P01733 AC125604.1-201ENST00000496255 707 ntBASIC11.12□□□□□ -0.63
TRBV12-3P01733 HIST2H2BC-201ENST00000498492 580 ntBASIC11.12□□□□□ -0.63
TRBV12-3P01733 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC11.12□□□□□ -0.63
TRBV12-3P01733 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TRBV12-3P01733 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC11.12□□□□□ -0.63
TRBV12-3P01733 SYT17-208ENST00000568433 812 ntTSL 3 BASIC11.12□□□□□ -0.63
TRBV12-3P01733 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC11.12□□□□□ -0.63
TRBV12-3P01733 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC11.12□□□□□ -0.63
TRBV12-3P01733 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRBV12-3P01733 AL645939.5-201ENST00000606834 243 ntBASIC11.12□□□□□ -0.63
TRBV12-3P01733 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC11.12□□□□□ -0.63
TRBV12-3P01733 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC11.12□□□□□ -0.63
TRBV12-3P01733 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC11.12□□□□□ -0.63
TRBV12-3P01733 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC11.12□□□□□ -0.63
TRBV12-3P01733 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC11.12□□□□□ -0.63
TRBV12-3P01733 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC11.12□□□□□ -0.63
TRBV12-3P01733 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRBV12-3P01733 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRBV12-3P01733 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRBV12-3P01733 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRBV12-3P01733 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRBV12-3P01733 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
TRBV12-3P01733 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRBV12-3P01733 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRBV12-3P01733 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC11.12□□□□□ -0.63
TRBV12-3P01733 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRBV12-3P01733 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TRBV12-3P01733 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRBV12-3P01733 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRBV12-3P01733 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRBV12-3P01733 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC11.12□□□□□ -0.63
TRBV12-3P01733 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRBV12-3P01733 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRBV12-3P01733 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRBV12-3P01733 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC11.12□□□□□ -0.63
TRBV12-3P01733 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRBV12-3P01733 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRBV12-3P01733 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC11.11□□□□□ -0.63
TRBV12-3P01733 AL157996.1-201ENST00000624684 2299 ntBASIC11.11□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms