Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.12■□□□□ 0.01
CLDN5O00501 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN5O00501 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN5O00501 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN5O00501 TUBB8P4-201ENST00000511806 1324 ntBASIC15.12■□□□□ 0.01
CLDN5O00501 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN5O00501 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CLDN5O00501 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN5O00501 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CLDN5O00501 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN5O00501 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CLDN5O00501 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN5O00501 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN5O00501 FAM90A2P-201ENST00000511144 1395 ntBASIC15.11■□□□□ 0.01
CLDN5O00501 FAM90A25P-201ENST00000528404 1395 ntBASIC15.11■□□□□ 0.01
CLDN5O00501 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN5O00501 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN5O00501 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CLDN5O00501 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN5O00501 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN5O00501 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN5O00501 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
CLDN5O00501 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN5O00501 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN5O00501 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN5O00501 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
CLDN5O00501 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
CLDN5O00501 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
CLDN5O00501 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.11■□□□□ 0.01
CLDN5O00501 AC005089.1-201ENST00000619486 2241 ntBASIC15.11■□□□□ 0.01
CLDN5O00501 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN5O00501 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN5O00501 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN5O00501 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN5O00501 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC15.11■□□□□ 0.01
CLDN5O00501 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CLDN5O00501 AL583805.1-201ENST00000391389 531 ntBASIC15.11■□□□□ 0.01
CLDN5O00501 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC15.11■□□□□ 0.01
CLDN5O00501 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC15.11■□□□□ 0.01
CLDN5O00501 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC15.11■□□□□ 0.01
CLDN5O00501 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN5O00501 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN5O00501 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN5O00501 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
CLDN5O00501 AL512310.5-201ENST00000551999 515 ntBASIC15.11■□□□□ 0.01
CLDN5O00501 AC079328.1-201ENST00000560358 952 ntBASIC15.11■□□□□ 0.01
CLDN5O00501 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CLDN5O00501 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC15.11■□□□□ 0.01
CLDN5O00501 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN5O00501 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CLDN5O00501 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC15.11■□□□□ 0.01
CLDN5O00501 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC15.11■□□□□ 0.01
CLDN5O00501 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN5O00501 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN5O00501 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN5O00501 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.11■□□□□ 0.01
CLDN5O00501 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN5O00501 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN5O00501 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN5O00501 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN5O00501 KRT18P9-201ENST00000604826 1300 ntBASIC15.11■□□□□ 0.01
CLDN5O00501 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.11■□□□□ 0.01
CLDN5O00501 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CLDN5O00501 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CLDN5O00501 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC15.11■□□□□ 0.01
CLDN5O00501 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN5O00501 AC097376.2-205ENST00000610159 5334 ntBASIC15.11■□□□□ 0.01
CLDN5O00501 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
CLDN5O00501 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN5O00501 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN5O00501 AC067931.2-201ENST00000623655 2003 ntBASIC15.1■□□□□ 0.01
CLDN5O00501 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN5O00501 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN5O00501 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN5O00501 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CLDN5O00501 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN5O00501 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CLDN5O00501 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN5O00501 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC15.1■□□□□ 0.01
CLDN5O00501 HSPA7-201ENST00000445535 1927 ntBASIC15.1■□□□□ 0.01
CLDN5O00501 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN5O00501 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN5O00501 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN5O00501 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN5O00501 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN5O00501 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN5O00501 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN5O00501 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC15.1■□□□□ 0.01
CLDN5O00501 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC15.1■□□□□ 0.01
CLDN5O00501 EEF1DP6-201ENST00000449232 372 ntBASIC15.1■□□□□ 0.01
CLDN5O00501 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC15.1■□□□□ 0.01
CLDN5O00501 AP000358.1-201ENST00000456260 156 ntBASIC15.1■□□□□ 0.01
CLDN5O00501 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC15.1■□□□□ 0.01
CLDN5O00501 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN5O00501 SKA2-205ENST00000580541 689 ntTSL 3 BASIC15.1■□□□□ 0.01
CLDN5O00501 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC15.1■□□□□ 0.01
CLDN5O00501 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CLDN5O00501 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.1■□□□□ 0.01
CLDN5O00501 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN5O00501 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms