Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 NPPA-201ENST00000376476 728 ntTSL 3 BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 TSPY25P-201ENST00000429463 745 ntBASIC12.68□□□□□ -0.38
NPIPB4C9JG80 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 SERPINA13P-202ENST00000478994 924 ntBASIC12.68□□□□□ -0.38
NPIPB4C9JG80 CHCHD2P2-201ENST00000503744 321 ntBASIC12.68□□□□□ -0.38
NPIPB4C9JG80 AC126915.1-201ENST00000522847 1038 ntBASIC12.68□□□□□ -0.38
NPIPB4C9JG80 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPB4C9JG80 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPB4C9JG80 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
NPIPB4C9JG80 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPB4C9JG80 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPB4C9JG80 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
NPIPB4C9JG80 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.67□□□□□ -0.38
NPIPB4C9JG80 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.67□□□□□ -0.38
NPIPB4C9JG80 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
NPIPB4C9JG80 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPB4C9JG80 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.67□□□□□ -0.38
NPIPB4C9JG80 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.67□□□□□ -0.38
NPIPB4C9JG80 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPB4C9JG80 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.67□□□□□ -0.38
NPIPB4C9JG80 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPB4C9JG80 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC12.67□□□□□ -0.38
NPIPB4C9JG80 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPB4C9JG80 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
NPIPB4C9JG80 EID1-202ENST00000560490 584 ntTSL 3 BASIC12.67□□□□□ -0.38
NPIPB4C9JG80 AC093752.3-201ENST00000567343 901 ntBASIC12.67□□□□□ -0.38
NPIPB4C9JG80 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC12.67□□□□□ -0.38
NPIPB4C9JG80 AL157813.1-201ENST00000612996 587 ntBASIC12.67□□□□□ -0.38
NPIPB4C9JG80 PRKN-211ENST00000615065 261 ntTSL 5 BASIC12.67□□□□□ -0.38
NPIPB4C9JG80 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPB4C9JG80 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPB4C9JG80 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPB4C9JG80 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPB4C9JG80 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPB4C9JG80 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPB4C9JG80 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPB4C9JG80 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
NPIPB4C9JG80 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPB4C9JG80 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPB4C9JG80 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPB4C9JG80 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPB4C9JG80 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPB4C9JG80 SALL4P6-201ENST00000429385 1691 ntBASIC12.67□□□□□ -0.38
NPIPB4C9JG80 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NPIPB4C9JG80 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.66□□□□□ -0.38
NPIPB4C9JG80 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.66□□□□□ -0.38
NPIPB4C9JG80 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.66□□□□□ -0.38
NPIPB4C9JG80 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NPIPB4C9JG80 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NPIPB4C9JG80 LINC01165-201ENST00000445190 1623 ntBASIC12.66□□□□□ -0.38
NPIPB4C9JG80 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NPIPB4C9JG80 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NPIPB4C9JG80 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
NPIPB4C9JG80 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
NPIPB4C9JG80 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NPIPB4C9JG80 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NPIPB4C9JG80 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.66□□□□□ -0.38
NPIPB4C9JG80 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NPIPB4C9JG80 AL139158.3-201ENST00000641212 1562 ntBASIC12.66□□□□□ -0.38
NPIPB4C9JG80 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.66□□□□□ -0.38
NPIPB4C9JG80 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NPIPB4C9JG80 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
NPIPB4C9JG80 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
NPIPB4C9JG80 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NPIPB4C9JG80 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NPIPB4C9JG80 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
NPIPB4C9JG80 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NPIPB4C9JG80 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NPIPB4C9JG80 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC12.66□□□□□ -0.38
NPIPB4C9JG80 AGER-203ENST00000375065 665 ntTSL 2 BASIC12.66□□□□□ -0.38
NPIPB4C9JG80 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms